DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and AT2G37890

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_181325.2 Gene:AT2G37890 / 818365 AraportID:AT2G37890 Length:337 Species:Arabidopsis thaliana


Alignment Length:188 Identity:53/188 - (28%)
Similarity:86/188 - (45%) Gaps:13/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VHAVSGAAGGCIAMSTFYPLDTVRSRLQLEE-----AGDVRSTRQVIKEIVLGEGFQSLYRGLGP 76
            ||.|||...|..|.:..||||.||:||..:.     .|...:.|.:.:|    ||...||:|||.
plant   150 VHFVSGGLAGITAATATYPLDLVRTRLAAQRNAIYYQGIEHTFRTICRE----EGILGLYKGLGA 210

  Fly    77 VLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRN 141
            .|..:..|..:.|..:.::|.......|:....:..|:.|.:||.::...|.|..:|..|:::..
plant   211 TLLGVGPSLAINFAAYESMKLFWHSHRPNDSDLVVSLVSGGLAGAVSSTATYPLDLVRRRMQVEG 275

  Fly   142 VAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPS-LMLVSNPALQFMMYEMLKR 198
            ..|.:...|   ..|....|::.:.||..|::.|.:|. ..:|....:.||.|:.|:|
plant   276 AGGRARVYN---TGLFGTFKHIFKSEGFKGIYRGILPEYYKVVPGVGIVFMTYDALRR 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 28/83 (34%)
Mito_carr 105..202 CDD:395101 23/95 (24%)
Mito_carr 214..303 CDD:395101
AT2G37890NP_181325.2 PTZ00169 44..332 CDD:240302 53/188 (28%)
Blue background indicates that the domain is not in the aligned region.

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