DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a43

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001004497.2 Gene:slc25a43 / 796731 ZFINID:ZDB-GENE-030616-69 Length:345 Species:Danio rerio


Alignment Length:324 Identity:71/324 - (21%)
Similarity:129/324 - (39%) Gaps:60/324 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAPSKLSQVLSYQNFVHAVSGAAGGCIAMSTFY------PLDTVRSRLQLEEAGDVRSTRQVIK 59
            |....|.:::.|.|:.:         |:..:..:      ||:.|:.   |.:.|.....|..:.
Zfish     1 MATVKKDARLTSSQSLM---------CVGFAGIFSKTVTSPLEVVKI---LSQVGTFHCKRGFLH 53

  Fly    60 EIVL---GEGFQSLYRG-------LGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLL 114
            ..||   .||.::.::|       |.| ..::.::.:......|    :...|..||..|   ::
Zfish    54 SFVLICQNEGLRAFWKGNMVSCLRLFP-YSAIHLATYKNIVNLH----IDELGDISQWRA---IV 110

  Fly   115 LGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWS----- 174
            .|.:|||...|.|.|..||.|||..:|....:      |:.||..|..:...||:..|:.     
Zfish   111 AGGLAGISAALATYPLEVVETRLIAQNCQEPT------YRGLLHSLSVIYRNEGLQALYRGFSLT 169

  Fly   175 --GTIPSLMLVSNPALQFMMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTK 237
              |.:|  ..|...|:...:.::.:...:|||     ||..|..|.:|...|..|::|.:.|:.|
Zfish   170 VLGAVP--FSVGCYAVYINLDKLWQERHVRFT-----SLQNFINGCLAAGVAQTLSFPFETVKKK 227

  Fly   238 QRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYE 301
            .:.:|.....    ..|.........:....:::::|:..|:.||.|.:::.|....|:|..:|
Zfish   228 MQAQSLVLPH----CGGVDVHFNGMADCFRQVIKNKGVMALWSGLTANMVKIVPYFGLLFSCFE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 15/96 (16%)
Mito_carr 105..202 CDD:395101 27/103 (26%)
Mito_carr 214..303 CDD:395101 19/88 (22%)
slc25a43NP_001004497.2 Solcar 1 11..100 17/105 (16%)
PTZ00169 20..274 CDD:240302 62/281 (22%)
Solcar 2 104..195 27/101 (27%)
Solcar 3 199..297 22/98 (22%)

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