DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a32

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001107692.1 Gene:slc25a32 / 779525 XenbaseID:XB-GENE-948423 Length:322 Species:Xenopus tropicalis


Alignment Length:326 Identity:88/326 - (26%)
Similarity:157/326 - (48%) Gaps:37/326 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAPS--------------KLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDV 51
            |.|||              .:.||..:..:.:.|:|.:||.|:....:|||.|:.|..:.:..::
 Frog     1 MAAPSDPAQRPALPASPLNAVGQVFRHVRYENLVAGLSGGVISTLVLHPLDLVKIRFAVSDGLEL 65

  Fly    52 ----RSTRQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKD 112
                |.....:..:...||.:.||:|:.|.:.....|..:||:.::|:||....|.....||::.
 Frog    66 RPKYRGILHCLSTVWQREGLRGLYQGVTPNMWGAGASWGLYFFFYNAVKAYKKEGRAEDLSAIEH 130

  Fly   113 LLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTI 177
            ||..:.||.:.:..|.|.||..|||.::..||. |...:.|:.:...|..:...|||.||:.|.|
 Frog   131 LLSAAGAGALTLCFTNPIWVTKTRLVLQYDAGI-DSTKRQYRGMFHALGKIYRHEGIPGLYKGFI 194

  Fly   178 PSLMLVSNPALQFMMYEMLK----RNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQ 238
            |.|:..|:.|||||.||.||    :::.|.:..::.:|.:..:.|::|.||...|||.|:|:.:.
 Frog   195 PGLLGTSHGALQFMAYEELKMDYNKHLNRPSDTKLSTLEYITMAALSKIFAVSATYPYQVVRARL 259

  Fly   239 RHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303
            :.:..              |....::::....:.:|:.|.::|:...||:......:.|:.|||:
 Frog   260 QDQHN--------------RYTGVIDVIRRTWRKEGVHGFYKGIVPNILRVTPACCITFVVYEKV 310

  Fly   304 A 304
            :
 Frog   311 S 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 21/84 (25%)
Mito_carr 105..202 CDD:395101 37/100 (37%)
Mito_carr 214..303 CDD:395101 18/88 (20%)
slc25a32NP_001107692.1 Mito_carr 30..116 CDD:395101 22/85 (26%)
Mito_carr 123..214 CDD:395101 35/91 (38%)
Mito_carr 228..316 CDD:395101 20/98 (20%)

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