DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a25b

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_009299818.1 Gene:slc25a25b / 569227 ZFINID:ZDB-GENE-060526-340 Length:536 Species:Danio rerio


Alignment Length:307 Identity:72/307 - (23%)
Similarity:140/307 - (45%) Gaps:44/307 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRSTR-----------QVIKEIVLGEGFQSLY 71
            |.|:|...|.::.:...|||.::..:|      |.:||           |:|:|    .|.:||:
Zfish   256 HLVAGGGAGAVSRTCTAPLDRLKVLMQ------VHATRSNSMGIAGGFTQMIRE----GGLRSLW 310

  Fly    72 RGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTR 136
            ||.|..:..:...:.:.|..:..:|.:. |.:......|:.|:.||:||.|...:..|..|:.||
Zfish   311 RGNGINVLKIAPESAIKFMAYEQIKRLI-GSNQETLGILERLVSGSLAGAIAQSSIYPMEVLKTR 374

  Fly   137 LRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM-LVSNPALQFMMYEMLKRN- 199
            |.:....        .|..:.:..|::.:|||:...:.|.||::: ::....:...:||.||.: 
Zfish   375 LALGRTG--------QYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSW 431

  Fly   200 IMRFT--GGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTEST 262
            :.||.  ..:.|.......|.::.....:.:|||.||:|:.:.::.:..|...|.:|        
Zfish   432 LQRFATDSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASQEGSPQMTMSG-------- 488

  Fly   263 LELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGM 309
              |...|::.:|..||:|||....::.:...::.::.||.:..|:|:
Zfish   489 --LFRHIVRTEGAIGLYRGLAPNFMKVIPAVSISYVVYENLKITLGV 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 21/88 (24%)
Mito_carr 105..202 CDD:395101 24/98 (24%)
Mito_carr 214..303 CDD:395101 20/88 (23%)
slc25a25bXP_009299818.1 FRQ1 66..210 CDD:444056
PTZ00169 258..512 CDD:240302 67/282 (24%)
Blue background indicates that the domain is not in the aligned region.

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