DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a36b

DIOPT Version :9

Sequence 1:NP_001246615.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_686599.4 Gene:slc25a36b / 558307 ZFINID:ZDB-GENE-080219-28 Length:311 Species:Danio rerio


Alignment Length:324 Identity:74/324 - (22%)
Similarity:132/324 - (40%) Gaps:67/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VHAVSGAAGGCIAMSTFYPLDTVRSRLQ-----------------------LEEAGDVRSTRQVI 58
            ||..:|..||.:......||:.|::|||                       :...|.:...|.::
Zfish     8 VHLFAGGCGGTVGAILTCPLEVVKTRLQSSSITLCISEVHLSTVNGASVARVAPPGPLHCLRIIL 72

  Fly    59 KEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHA----LKAVASGGSPSQHSALKDLLLGSIA 119
            ::    ||.:||:|||||.|..:..|..:||..:.:    |..|....|...|.|     ...||
Zfish    73 EK----EGPRSLFRGLGPNLIGVAPSRAIYFAAYSSAKEKLNCVFEPDSTGLHMA-----SAGIA 128

  Fly   120 GIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVS 184
            |...:..|.|.|::.|||::     .:....:...|..|.::.|.:.:|:.|.:.|...|...:|
Zfish   129 GFTAITATNPIWLIKTRLQL-----DARSRGERRMNAFECVRRVYQTDGVRGFYRGMSASYAGIS 188

  Fly   185 NPALQFMMYEMLKRNIMRFTGG-------EMGSLSFFFIG-----AIAKAFATVLTYPLQLVQTK 237
            ...:.|::||.:||.:......       :....:..|:|     |.:|..||.:.||.::::|:
Zfish   189 ETVIHFVIYESIKRRLSEAKAATHMNEDEDRAKSASDFVGMMLAAATSKTCATCIAYPHEVIRTR 253

  Fly   238 QRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYE 301
            .|...              .:..|..:.:..::|.:..|.|:|||...:::.:...|:|...||
Zfish   254 LREEG--------------TKYRSFFQSLNLVIQEESYRALYRGLTTHLVRQIPNTAIMMCTYE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_001246615.1 Mito_carr 15..96 CDD:278578 26/105 (25%)
Mito_carr 105..202 CDD:278578 24/96 (25%)
Mito_carr 214..303 CDD:278578 21/93 (23%)
slc25a36bXP_686599.4 Mito_carr 2..109 CDD:278578 26/104 (25%)
PTZ00169 5..290 CDD:240302 70/309 (23%)
Mito_carr 114..206 CDD:278578 25/101 (25%)
Mito_carr 226..305 CDD:278578 21/92 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53601
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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