DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and Slc25a36

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001414658.1 Gene:Slc25a36 / 501039 RGDID:1591928 Length:311 Species:Rattus norvegicus


Alignment Length:326 Identity:78/326 - (23%)
Similarity:136/326 - (41%) Gaps:67/326 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VHAVSGAAGGCIAMSTFYPLDTVRSRLQLEE-------------AGDVRSTRQVI--------KE 60
            ||..:|..||.:......||:.|::|||...             ||  .|..:|:        |.
  Rat     8 VHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAG--ASVNRVVSPGPLHCLKV 70

  Fly    61 IVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASG----GSPSQHSALKDLLLGSIAGI 121
            |:..||.:||:|||||.|..:..|..:||..:...|...:|    .|...|     ::..::||.
  Rat    71 ILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNGVFDPDSTQVH-----MISAAMAGF 130

  Fly   122 INVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNL--LEGLKYVAEKEGIAGLWSGTIPSLMLVS 184
            ..:..|.|.|::.|||::       |..|:..|.:  .|.::.|.:.:|:.|.:.|...|...:|
  Rat   131 TAITATNPIWLIKTRLQL-------DARNRGEKRMGAFECVRKVYQTDGLRGFYRGMSASYAGIS 188

  Fly   185 NPALQFMMYEMLKRNIMRFTGGEM------------GSLSFFFIGAIAKAFATVLTYPLQLVQTK 237
            ...:.|::||.:|:.::......|            ..:......|.:|..||.:.||.::|:|:
  Rat   189 ETVIHFVIYESIKQKLLECKTASMMETDEESVKEASDFVRMMLAAATSKTCATTVAYPHEVVRTR 253

  Fly   238 QRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEK 302
            .|...              .:..|..:.:..|:|.:|...|:|||...:::.:...|:|...||.
  Rat   254 LREEG--------------TKYRSFFQTLSLIVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYEL 304

  Fly   303 I 303
            :
  Rat   305 V 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 30/99 (30%)
Mito_carr 105..202 CDD:395101 23/98 (23%)
Mito_carr 214..303 CDD:395101 21/88 (24%)
Slc25a36NP_001414658.1 None

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