DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a24

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001011047.1 Gene:slc25a24 / 496457 XenbaseID:XB-GENE-976243 Length:473 Species:Xenopus tropicalis


Alignment Length:298 Identity:62/298 - (20%)
Similarity:131/298 - (43%) Gaps:31/298 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLE----EAGDVRSTRQVIKEIVLGEGFQSLYRGLGPVLQS 80
            ::|...|.::.:...|||.::..:|:.    .|..:...:|::||    .|.:||:||.|..:..
 Frog   199 LAGGMAGAVSRTGTAPLDRLKVMMQVHGSKGNANIITGLKQMVKE----GGIRSLWRGNGVNVIK 259

  Fly    81 LCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGT 145
            :.....:.|:.:...|.:.:..|....:| :..:.||:||.....:..|..|:.|||.:....  
 Frog   260 IAPETAMKFWAYEQYKKLFTSESGKLGTA-ERFIAGSLAGATAQTSIYPMEVLKTRLAVGKTG-- 321

  Fly   146 SDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM-LVSNPALQFMMYEMLKRNIMR---FTGG 206
                  .|..:.:..|.:.::||:...:.|.||::: ::....:...:||.||...::   ....
 Frog   322 ------QYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSA 380

  Fly   207 EMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQ 271
            ..|.|.....|..:.....:.:|||.|::|:.:.:: ..:..|..:.|.         |...|:.
 Frog   381 NPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQA-SIEGAPQLNMGG---------LFRKIVA 435

  Fly   272 HQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGM 309
            .:|..||:||:....|:.:...::.::.|||:...:|:
 Frog   436 KEGFFGLYRGIAPNFLKVLPAVSISYVVYEKMKIKLGI 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 17/79 (22%)
Mito_carr 105..202 CDD:395101 21/97 (22%)
Mito_carr 214..303 CDD:395101 18/88 (20%)
slc25a24NP_001011047.1 Regulatory N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q6NUK1 1..173
FRQ1 22..151 CDD:444056
Linker region. /evidence=ECO:0000250|UniProtKB:Q6NUK1 159..168
C-terminal transmembrane transporter domain. /evidence=ECO:0000250|UniProtKB:Q6NUK1 174..473 61/296 (21%)
PTZ00169 199..452 CDD:240302 57/275 (21%)
Blue background indicates that the domain is not in the aligned region.

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