DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a36a

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001002667.1 Gene:slc25a36a / 436940 ZFINID:ZDB-GENE-040718-415 Length:311 Species:Danio rerio


Alignment Length:324 Identity:80/324 - (24%)
Similarity:137/324 - (42%) Gaps:63/324 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRSTRQV-------------------IKEIV 62
            ||..:|..||.:......||:.|::|||........|..|:                   :|.|:
Zfish     8 VHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTFYISEVQLSTVNGASVARMAPPGPLHCLKLIL 72

  Fly    63 LGEGFQSLYRGLGPVLQSLCISNFVYFYTF----HALKAVASGGSPSQHSALKDLLLGSIAGIIN 123
            ..||.:||:|||||.|..:..|..:||..:    ..|..|....|...|     :|...:||...
Zfish    73 EKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSTSKEKLNNVFDPDSTQVH-----MLSAGLAGFTA 132

  Fly   124 VLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNL--LEGLKYVAEKEGIAGLWSGTIPSLMLVSNP 186
            :..|.|.|::.|||::       |..|:..:.:  .|.::.|.:.:|:.|.:.|...|...:|..
Zfish   133 ITATNPIWLIKTRLQL-------DARNRGERRMSAFECVRRVYQSDGLRGFYRGMSASYAGISET 190

  Fly   187 ALQFMMYEMLKRNIMRFTGG-------EMGSLSFFFIG-----AIAKAFATVLTYPLQLVQTKQR 239
            .:.|::||.:||.::.....       |....:..|:|     |.:|..||.:.||.::::|   
Zfish   191 VIHFVIYESIKRKLIEHKANSNMDDEDESVKDASDFVGMMLAAATSKTCATSIAYPHEVIRT--- 252

  Fly   240 HRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303
             |.:|..||          ..|..:.:..:.:.:|.|.|:|||...:::.:...|:|...||.:
Zfish   253 -RLREEGSK----------YRSFFQTLNMVFREEGYRALYRGLTTHLVRQIPNTAIMMCTYELV 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 28/101 (28%)
Mito_carr 105..202 CDD:395101 24/98 (24%)
Mito_carr 214..303 CDD:395101 24/93 (26%)
slc25a36aNP_001002667.1 Mito_carr 2..113 CDD:395101 29/104 (28%)
Solcar 1 4..108 28/99 (28%)
Mito_carr 114..208 CDD:395101 25/105 (24%)
Solcar 2 116..203 24/98 (24%)
Solcar 3 224..308 24/96 (25%)
Mito_carr 226..311 CDD:395101 24/94 (26%)

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