Protein Alignment PMP34 and CG7943

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_651766.1
• Gene: CG7943 / 43574
• FlyBaseID: FBgn0039741
• Length: 332
• Species: Drosophila melanogaster
• Alignment Length: 306
• Identity: 67/306 - (21%)
• Similarity: 111/306 - (36%)
• Gaps: 72/306 - (23%)

  Fly    24 AGGC----IAMSTFYPLDTVRSRLQLEEAGDVRSTRQVIKEIVLGEGFQSLYRGLGPVLQSLCIS 84
            |.||    :.::..||:..:..|..|.......:..|:..|   |.||  ||||:.|.|....||
  Fly    58 ACGCGAAFVNIAVTYPIYKMIFRQMLHGVPITSAFAQLRHE---GLGF--LYRGMLPPLAQKTIS 117

  Fly    85 NFVYF------------------YTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFW 131
            ..:.|                  |....|.||.:|.:.|       :||             ||.
  Fly   118 LSIMFGVFDGTRRYLVEDYRLNDYGAKVLAAVVAGSAES-------ILL-------------PFE 162

  Fly   132 VVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLML--VSNPALQFMMYE 194
            .|.|.|       ...:.::|:.|.....:||....|...|:.|..|....  :|| ||.|::.|
  Fly   163 RVQTLL-------ADSKFHQHFSNTQNAFRYVVSHHGYRELYRGLEPVFWRNGLSN-ALFFVLRE 219

  Fly   195 MLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRT 259
            .....:.:.......::..|..||:..|..:.:.|||.::             |.|..:....|:
  Fly   220 EASVRLPKRKSVSTRTVQEFIAGAVIGASISTIFYPLNVI-------------KVSLQSEMGQRS 271

  Fly   260 ESTLEL--MISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303
            |.:.:.  .|.:.:.:.|...:||......::.::..:|..|||.:
  Fly   272 EGSWQACKRIYVERDRRIGNFYRGCPFNTGRSFISWGIMNTAYENL 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	22/93 (24%)
		Mito_carr	105..202	CDD:278578	22/98 (22%)
		Mito_carr	214..303	CDD:278578	19/90 (21%)
CG7943	NP_651766.1	Mito_carr	54..136	CDD:278578	21/82 (26%)
		Mito_carr	141..229	CDD:278578	27/115 (23%)
		Mito_carr	235..322	CDD:278578	19/96 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442010
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930