Protein Alignment PMP34 and GC2

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_731657.2
• Gene: GC2 / 41449
• FlyBaseID: FBgn0037970
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 323
• Identity: 68/323 - (21%)
• Similarity: 126/323 - (39%)
• Gaps: 64/323 - (19%)

  Fly    16 FVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGD-----VRSTRQVIKEIVLGEGFQSLYRGLG 75
            |...::|...|.|.::..||||.|::|||.:..|.     ..|.....::.:..||:..:|||
  Fly    21 FPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRG-- 83

  Fly    76 PVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKD--------LLLGSIAGIINVLTTTPFWV 132
                  ...|.|......|:|..|:... ..|.|..|        .|.|.:||:..::.|||..:
  Fly    84 ------SAVNIVLITPEKAIKLTANDFF-RYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMEL 141

  Fly   133 VNTRLRMRN---VAGTSDEVNKHYKNLLE-GL-KYVAEKEGIAGLWSGTIPSLMLVSNPALQFMM 192
            :  :::|::   ||.......:..|.:.. || |.:..:.||.||:.|       |....::.:.
  Fly   142 L--KIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKG-------VGATGVRDIT 197

  Fly   193 YEMLKRNIMRFTGGE-------MGSLSFFF---IGAIAKAFATVLTYPLQLVQTKQRHRSKESDS 247
            :.|:...:|.:...:       .|...|::   .|.::...:..:..|..:|:|:
  Fly   198 FSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTR---------- 252

  Fly   248 KPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAY-----EKIAG 305
               ..|....:.:..::.:...|:.:||...|:|...:|:.......:..|.|     |||.|
  Fly   253 ---LQADGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLGVGEKILG 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	22/84 (26%)
		Mito_carr	105..202	CDD:278578	24/109 (22%)
		Mito_carr	214..303	CDD:278578	14/96 (15%)
GC2	NP_731657.2	PTZ00169	14..289	CDD:240302	61/298 (20%)
		Mito_carr	16..106	CDD:278578	24/93 (26%)
		Mito_carr	123..203	CDD:278578	21/88 (24%)
		Mito_carr	228..302	CDD:278578	12/86 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442016
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840