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Protein Alignment PMP34 and GC1
DIOPT Version :9
Sequence 1: | NP_001246615.1 |
Gene: | PMP34 / 38532 |
FlyBaseID: | FBgn0052250 |
Length: | 314 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001262490.1 |
Gene: | GC1 / 41448 |
FlyBaseID: | FBgn0260743 |
Length: | 321 |
Species: | Drosophila melanogaster |
Alignment Length: | 193 |
Identity: | 45/193 - (23%) |
Similarity: | 98/193 - (50%) |
Gaps: | 7/193 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 106 QHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIA 170
|.:.|..::.|.|||||.|....|..:|.|||:.:.:....:.: |.::.:..:...:.||..
Fly 18 QFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERM---YNSMFDCFRKTYKAEGYF 79
Fly 171 GLWSGTIPSLMLVS-NPALQFMMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLV 234
|::.|:..:::|:: ..|::....:.. |:.:....|::...|....|.:|.||..::|.|::|:
Fly 80 GMYRGSGVNILLITPEKAIKLTANDYF-RHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELL 143
Fly 235 QTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMF 297
:.:.:...:.:.: :..||.|....|..:|...:::.:||.||::|:.|..|:.|..:.:.|
Fly 144 KIQMQDAGRVAAA--AKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYF 204
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45442015 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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