DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a25a

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_998422.1 Gene:slc25a25a / 406541 ZFINID:ZDB-GENE-040426-2396 Length:469 Species:Danio rerio


Alignment Length:302 Identity:75/302 - (24%)
Similarity:137/302 - (45%) Gaps:34/302 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGD-----VRSTRQVIKEIVLGEGFQSLYRGLGPV 77
            |.|||...|.::.:...|||.::..:|:.....     :....|:|||    .|.:||:||.|..
Zfish   189 HLVSGGGAGAVSRTCTAPLDRLKVLMQVHGCQGKSMCLMSGLTQMIKE----GGVRSLWRGNGIN 249

  Fly    78 LQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNV 142
            :..:.....:.|..:..:|.| .|.|.......:..:.||:||:|...|..|..|:.|||.:|..
Zfish   250 VIKIAPETALKFMAYEQIKRV-MGSSQETLGISERFVAGSLAGVIAQSTIYPMEVLKTRLALRKT 313

  Fly   143 AGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM-LVSNPALQFMMYEMLKRNIMRFTGG 206
            .        .||.:.:..|::.:.||::..:.|.:|::: ::....:...:||.||...::..|.
Zfish   314 G--------QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGT 370

  Fly   207 EMGSLSFFFI---GAIAKAFATVLTYPLQLVQTK-QRHRSKESDSKPSTSAGSTPRTESTLELMI 267
            |......|.:   |.::.....:.:|||.|::|: |...|.|..|:.|.:.           |..
Zfish   371 ENADPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTG-----------LFK 424

  Fly   268 SILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGM 309
            .|::.:|..||:|||....|:.:...::.::.||.|..|:|:
Zfish   425 QIMKTEGPTGLYRGLTPNFLKVIPAVSISYVVYEHIKSTLGV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 20/82 (24%)
Mito_carr 105..202 CDD:395101 23/97 (24%)
Mito_carr 214..303 CDD:395101 23/92 (25%)
slc25a25aNP_998422.1 FRQ1 40..141 CDD:444056
Solcar 1 184..270 21/84 (25%)
PTZ00169 191..445 CDD:240302 68/277 (25%)
Solcar 2 278..363 23/92 (25%)
Solcar 3 375..463 24/98 (24%)
Blue background indicates that the domain is not in the aligned region.

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