DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMP34 and slc25a19

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_991278.1 Gene:slc25a19 / 403024 ZFINID:ZDB-GENE-050417-292 Length:313 Species:Danio rerio


Alignment Length:306 Identity:74/306 - (24%)
Similarity:125/306 - (40%) Gaps:22/306 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 AVSGAAGGCIAMSTFYPLDTVRSRLQLE-EAGDVRSTR-------QVIKEIVLGEGFQSLYRGLG 75
            |::|:|.|.:..:...|||.|:.|.||: |....||.:       |..:.|:..||..:.::|..
Zfish    19 ALAGSAAGIVTRALISPLDVVKIRFQLQIEKVSWRSRQGKYWGLWQATRCILTEEGLPAFWKGHI 83

  Fly    76 PV-LQSLCISNFVYFYTFHALKAVASGGSP-SQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLR 138
            |. |.|:|. ..|.|.:|..|..:....:| :..:|....:.|.:|.....:...|...:.||..
Zfish    84 PAQLLSVCY-GAVQFASFEVLTELVHKKTPYNSQTAGVHFICGGLAACSATVACQPLDTLRTRFA 147

  Fly   139 MRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVSNPA-LQFMMYEMLKRNIMR 202
            .:...       |.|:||...:..:....|....:.|..|:|:.|...| |||..|.:||:.:..
Zfish   148 AQGEP-------KIYRNLRHAIGTMLRSGGPFTFYRGLTPTLVAVFPYAGLQFFFYNILKKLLEH 205

  Fly   203 FTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMI 267
            ........|.....|:.|...:..||||..|::.:.:....|   :.....|........::.::
Zfish   206 QDTKSKAGLHSLISGSCAGVISKTLTYPFDLIKKRLQVGGFE---EARLKFGEVRTYHGFVDCVL 267

  Fly   268 SILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGMLLKR 313
            .|.:.:|.||.|:||...:|:..|:....|..||.....:..|..|
Zfish   268 RIGREEGPRGFFKGLSPSLLKAALSTGFTFFWYEFFISAIVSLKSR 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 26/85 (31%)
Mito_carr 105..202 CDD:395101 22/97 (23%)
Mito_carr 214..303 CDD:395101 21/88 (24%)
slc25a19NP_991278.1 Mito_carr 20..110 CDD:395101 26/90 (29%)
Mito_carr 117..203 CDD:395101 22/92 (24%)
Mito_carr 214..303 CDD:395101 22/91 (24%)

Return to query results.
Submit another query.