DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and Dic4

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_649054.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster


Alignment Length:288 Identity:63/288 - (21%)
Similarity:128/288 - (44%) Gaps:33/288 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRSTRQVIKEIVLGEGFQSLYRGL-GPVLQSLCISN 85
            |.|..|:|.:. .|:|.|::.:|::.  ..||....:|.|...:|:...|.|. ..:|:.:..:|
  Fly    27 GFASMCVAFAV-APIDIVKTHMQIQR--QKRSILGTVKRIHSLKGYLGFYDGFSAAILRQMTSTN 88

  Fly    86 --FVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDE 148
              |:.:.|...::.|      .:.|.|..::||.:||........|..::|  :||:........
  Fly    89 IHFIVYDTGKKM
EYV------DRDSYLGKIILGCVAGACGSAFGIPTDLIN--VRMQTDMKEPPY 145

  Fly   149 VNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVS-NPALQFMMYEMLKRNIMRFTGGEMGSLS 212
            ..::||::.:||..:.::||...|:.|...::...| :...|...|:::|..:.:......|...
  Fly   146 KRRNYKHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRKNISVNDGLPL 210

  Fly   213 FFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRT--ESTLELMISILQHQGI 275
            .|.........::.:|:||.:|:|..      .:|:|...     ||  ::::.:|     ..|:
  Fly   211 HFLTSLGTSIISSAITHPLDVVRTIM------MNSRPGEF-----RTVFQASVHMM-----RFGV 259

  Fly   276 RGLFRGLEAKILQTVLTAALMFMAYEKI 303
            .|.:||....|::......|:|:.||::
  Fly   260 MGPYRGFVPTIVRKAPATTLLFVLYEQL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 19/76 (25%)
Mito_carr 105..202 CDD:395101 22/97 (23%)
Mito_carr 214..303 CDD:395101 20/90 (22%)
Dic4NP_649054.1 Mito_carr 26..100 CDD:395101 19/75 (25%)
Mito_carr 104..201 CDD:395101 22/98 (22%)
Mito_carr 211..292 CDD:395101 20/93 (22%)

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