DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a20

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_957153.1 Gene:slc25a20 / 393833 ZFINID:ZDB-GENE-040426-1869 Length:300 Species:Danio rerio


Alignment Length:310 Identity:71/310 - (22%)
Similarity:130/310 - (41%) Gaps:37/310 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SKLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLE------EAGDVRSTRQVIKEIVL 63
            ||...:...:||   .:|..||...:...:||||::.|||.:      |......|....|:.:.
Zfish     2 SKQQPISPMKNF---FAGGFGGVCLVFAGHPLDTIKVRLQTQPKPRPGEVAQYAGTFDCFKKTLA 63

  Fly    64 GEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGS---IAGIINVL 125
            .||.:.||:|:...:..:.....|.|:.|..       |...|.....|:|...   .||:::.:
Zfish    64 KEGVRGLYKGMAAPIIGVTPMFAVCFFGFGL-------GKKLQQKTPDDILTYPQLFAAGMLSGV 121

  Fly   126 TTTPFWVVNTRLR-MRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLML-VSNPAL 188
            .||.......|:: :..:...|.:|.  |...::.:|.:..:.||.|::.||..:||. |....:
Zfish   122 FTTAIMAPGERIKCLLQIQAASGQVK--YAGPMDCVKQLYRESGIRGIYKGTALTLMRDVPASGM 184

  Fly   189 QFMMYEMLKRNIM--RFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPST 251
            .||.||.||..:.  ..:..|:...|..|.|.:|..|...:..|..::  |.|.::......|: 
Zfish   185 YFMTYEWLKHALTPEGKSPSELSVPSILFAGGMAGIFNWAVAIPPDVL--KSRFQTAPEGKYPN- 246

  Fly   252 SAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYE 301
                     ...:::..:::.:|:|.|::|..|.:|:.....|..|:.:|
Zfish   247 ---------GFRDVLRELVREEGVRSLYKGFNAVMLRAFPANAACFLGFE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 23/86 (27%)
Mito_carr 105..202 CDD:395101 26/103 (25%)
Mito_carr 214..303 CDD:395101 17/88 (19%)
slc25a20NP_957153.1 Mito_carr 5..101 CDD:395101 25/105 (24%)
Mito_carr 107..197 CDD:395101 24/91 (26%)
Mito_carr 204..293 CDD:395101 19/96 (20%)

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