Protein Alignment PMP34 and Tyler

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_608327.2
• Gene: Tyler / 3772349
• FlyBaseID: FBgn0031038
• Length: 441
• Species: Drosophila melanogaster
• Alignment Length: 378
• Identity: 93/378 - (24%)
• Similarity: 138/378 - (36%)
• Gaps: 104/378 - (27%)

  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLEEA-------------------------GDV-------- 51
            ||...||.|......||:.|::|:|.:.|                         .|:
  Fly    50 VSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVPKPGRD 114

  Fly    52 -------RSTRQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASG----GSPS 105
                   |.......:||...||..|:.||.|.|.|...|..:||.|:..:|...|.    ....
  Fly   115 PQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQKF 179

  Fly   106 QHSALKDLLLGSIAGI--------INVLTTTPFWVVN---------------------TRLRMRN 141
            :.|.:||.:.|:..|.        |||..|.|....:                     |.:.|..
  Fly   180 EESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTIVVTAITPIEMVR 244

  Fly   142 VAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLML-VSNPALQFMMYEMLKRNIMRFTG 205
            :...|:.:.  |..|...|:.:..:.||.|||.|..|::|. .......:.:||.:||   .|:.
  Fly   245 IKMQSEYMT--YAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYEAIKR---AFSV 304

  Fly   206 GEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKE-------------SDSKPSTSAGSTP 257
            .|...|..|..|||:.|.||.:|.|..|:.|   |...|             :.:...|.||:.|
  Fly   305 TEPTFLFSFLTGAISGAVATFVTMPFDLITT---HTQIELGQDVLYEEIGAGTGAGTGTGAGARP 366

  Fly   258 RT---------ESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYE 301
            :|         .|.|..|..|.:.||:|||:.|:..::|:.|...|:|...:|
  Fly   367 KTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFE 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	27/115 (23%)
		Mito_carr	105..202	CDD:278578	28/126 (22%)
		Mito_carr	214..303	CDD:278578	33/110 (30%)
Tyler	NP_608327.2	Mito_carr	41..171	CDD:278578	28/120 (23%)
		Mito_carr	216..302	CDD:278578	18/90 (20%)
		Mito_carr	306..429	CDD:278578	35/117 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441475
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840