Protein Alignment PMP34 and sea

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 293
• Identity: 77/293 - (26%)
• Similarity: 133/293 - (45%)
• Gaps: 35/293 - (11%)

  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRSTRQV---IKEIVLGEGFQSLYRGLGPVLQSL 81
            |:|...|.|.:...||.:.|:::|||:|.|..:....:   :|:.|...||..|||||..::...
  Fly    38 VAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGS 102

  Fly    82 CISNFVYFYTFHALK--AVASGGSPSQHSALKDLLLGSIAGIIN-VLTTTPFWVVNTRLRMRNVA 143
            ...:...|..|..||  ||.|.|   |.|....||.|..||:.. ::..||...:..:......:
  Fly   103 IPKSAARFGAFEFLKSNAVDSRG---QLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQRS 164

  Fly   144 GTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLV-SNPALQFMMYEMLKRNIMRFTGGE 207
            |     |..::....|:..:.:.|||:|::.|..|:::.. ||.|::|.:.|.||.   .:.|.:
  Fly   165 G-----NPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKD---LYKGDD 221

  Fly   208 ----MGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMIS 268
                :..|.....||||.|.:.....||.:|:|  |.:..|:.           :.::|....:.
  Fly   222 HTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKT--RMQGLEAS-----------KYKNTAHCAVE 273

  Fly   269 ILQHQGIRGLFRGLEAKILQTVLTAALMFMAYE 301
            ||:::|....::|...::.:..|..|:.||.|:
  Fly   274 ILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYD 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	23/78 (29%)
		Mito_carr	105..202	CDD:278578	25/98 (26%)
		Mito_carr	214..303	CDD:278578	21/88 (24%)
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	74/287 (26%)
		Mito_carr	34..117	CDD:278578	23/78 (29%)
		Mito_carr	125..220	CDD:278578	26/105 (25%)
		Mito_carr	235..314	CDD:278578	21/85 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442014
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840