DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and CG8026

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_724769.2 Gene:CG8026 / 35941 FlyBaseID:FBgn0033391 Length:322 Species:Drosophila melanogaster


Alignment Length:313 Identity:83/313 - (26%)
Similarity:151/313 - (48%) Gaps:31/313 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APSKLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEE-----AGDVRSTRQVIKEIV 62
            :|.|.: |.::..:.|.|:|.:||.::....:|||.::.|..:.:     ....|........|.
  Fly    11 SPKKFN-VFAHVKYEHLVAGVSGGVVSTLILHPLDLIKIRFAVNDGRTATVPQYRGLSSAFTTIF 74

  Fly    63 LGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQH-SALKDLLLGSIAGIINVLT 126
            ..|||:.||:|:.|.:.....|..:||..::.:|....||:.:.. ....::|..:.:||:.:|.
  Fly    75 RQEGFRGLYKGVTPNVWGSGSSWGLYFMFYNTIKTFIQGGNTTMPLGPTMNMLAAAESGILTLLL 139

  Fly   127 TTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVSNPALQFM 191
            |.|.|||.|||.::..|.:|.|    |:.::..|..:.::|||.||:.|.:|.::.||:.|:|||
  Fly   140 TNPIWVVKTRLCLQCDAASSAE----YRGMIHALGQIYKEEGIRGLYRGFVPGMLGVSHGAIQFM 200

  Fly   192 MYEMLKRNIMRF----TGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTK-QRHRSKESDSKPST 251
            .||.||.....:    ...::.:..:....|::|..|...|||.|:|:.: |.|..         
  Fly   201 TYEELKNAYNEYRKLPIDTKLATTEYLAFAAVSKLIAAAATYPYQVVRARLQDHHH--------- 256

  Fly   252 SAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIA 304
                  |...|.:.:....:.:|.||.::||:|.:.:.|....:.|:.||.::
  Fly   257 ------RYNGTWDCIKQTWRFEGYRGFYKGLKASLTRVVPACMVTFLVYENVS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 21/85 (25%)
Mito_carr 105..202 CDD:395101 34/97 (35%)
Mito_carr 214..303 CDD:395101 22/89 (25%)
CG8026NP_724769.2 Mito_carr 23..115 CDD:395101 23/91 (25%)
Mito_carr 119..213 CDD:395101 34/97 (35%)
Mito_carr 220..307 CDD:395101 22/99 (22%)

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