Protein Alignment PMP34 and Rim2

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 369
• Identity: 80/369 - (21%)
• Similarity: 147/369 - (39%)
• Gaps: 96/369 - (26%)

  Fly    17 VHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEA--------------------------------- 48
            :|.::|.:.|.:......||:.|::|||...|
  Fly    10 IHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLS 74

  Fly    49 -------------GDVR------------------STRQVIKEIVLGEGFQSLYRGLGPVLQSLC 82
                         |.||                  |..|.::.||..||.::|::||||.|..:.
  Fly    75 TTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVA 139

  Fly    83 ISNFVYFYTFHALK-AVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTS 146
            .|..:||.|:...| .:.|.|...:.|.|..::..:.||.::...|.|.|.|.||:::
  Fly   140 PSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQL------- 197

  Fly   147 DEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVSNPALQFMMYEMLKRNIMR-------FT 204
            |..:|....:.:.::.|..:.|:|..:.|...|...:....:.|::||.:|..::.       .|
  Fly   198 DYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQRHTDT 262

  Fly   205 GGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMISI 269
            .|....|.|...||::|..|:.:.||.::.:|:.|....:.:|...|              :.::
  Fly   263 KGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQT--------------LHTV 313

  Fly   270 LQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGMLLKR 313
            .:.:|..||:|||..::::.:...|:|...||.:   |.:|.:|
  Fly   314 WKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAV---VYVLTRR 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	29/142 (20%)
		Mito_carr	105..202	CDD:278578	21/96 (22%)
		Mito_carr	214..303	CDD:278578	20/88 (23%)
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	30/145 (21%)
		Mito_carr	163..253	CDD:278578	21/96 (22%)
		Mito_carr	268..355	CDD:278578	25/104 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442024
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG4266
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740