Protein Alignment PMP34 and Ucp4A

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_001188664.1
• Gene: Ucp4A / 32764
• FlyBaseID: FBgn0030872
• Length: 340
• Species: Drosophila melanogaster
• Alignment Length: 340
• Identity: 71/340 - (20%)
• Similarity: 134/340 - (39%)
• Gaps: 58/340 - (17%)

  Fly     3 APSKLSQVLSYQNFVHA--------VSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRST----- 54
            |||.....|....|.:|        ||..|.....::| ||||..::|||::..|...|.
  Fly    21 APSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELAT-YPLDLTKTRLQIQGEGAAHSAGKSNM 84

  Fly    55 --RQVIKE---IVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLL 114
              |.::..   |...||...|::|:.|.|....:.:.|...::..::...:..........|..|
  Fly    85 QYRGMVATAFGIAREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSAL 149

  Fly   115 LGSIAGIINVLTTTPFWVVNTRLRM---RNVAGTSDEVNK--HYKNLLEGLKYVAEKEGIAGLWS 174
            .|..||.:.....:|..:|..:::|   |.:.|....|:.  |      ..:.:.::.||.|||.
  Fly   150 CGVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGH------AFRQIVQRGGIKGLWK 208

  Fly   175 GTIPSLMLVSNPAL----QFMMYEMLKRNIMR-------FTGGEMGSLSFFFIGAIAKAFATVLT 228
            |:||:   |...||    ....|:.:|..||.       .|...:.|:...|:.||       :.
  Fly   209 GSIPN---VQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAI-------MG 263

  Fly   229 YPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTA 293
            .|..:|:|:..::..:.:.:.....||       ::.:...:..:|...|::|.....::....:
  Fly   264 TPADVVKTRIMNQPTDENGRGLLYRGS-------VDCLRQTVSKEGFVALYKGFLPCWIRMAPWS 321

  Fly   294 ALMFMAYEKIAGTVG 308
            ...::::|:|...:|
  Fly   322 LTFWLSFEQIRKMIG 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	24/98 (24%)
		Mito_carr	105..202	CDD:278578	26/105 (25%)
		Mito_carr	214..303	CDD:278578	12/88 (14%)
Ucp4A	NP_001188664.1	PTZ00169	39..335	CDD:240302	64/319 (20%)
		Mito_carr	39..138	CDD:278578	22/99 (22%)
		Mito_carr	142..239	CDD:278578	27/105 (26%)
		Mito_carr	248..336	CDD:278578	14/101 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441666
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930