DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and Slc25a2

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001099622.1 Gene:Slc25a2 / 291640 RGDID:1310667 Length:265 Species:Rattus norvegicus


Alignment Length:208 Identity:55/208 - (26%)
Similarity:95/208 - (45%) Gaps:19/208 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SKLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQ----LEEAGDVRSTR----QVIKEI 61
            :::.|.....:|..|.:|:.....|.....|.:.|:.|||    :..||..:.:.    .::|.|
  Rat    60 ARVEQSAELNDFETATAGSLASAFAALVLCPTELVKCRLQTMHEMRVAGKTKHSHNTIWSMVKSI 124

  Fly    62 VLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKA-VASGGSPSQHSALKDLLLGSIAGIINVL 125
            .:.:|....||||...|.......|.||..:...:: .|||||..:...:..:|.||.||:...|
  Rat   125 FMKDGPLGFYRGLSTTLAQEIPGYFFYFGGYEISRSFFASGGSKDELGPVPLMLSGSFAGVCLWL 189

  Fly   126 TTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM--LVSNPAL 188
            ...|...:.:|:::.::.|....:.|.:.|       |...|||..|:||...:|:  :.||.||
  Rat   190 IIFPVDCIKSRIQVLSMFGKPAGLIKTFIN-------VVRNEGILALYSGLKATLIRAIPSNAAL 247

  Fly   189 QFMMYEMLKRNIM 201
             |::||..::.:|
  Rat   248 -FVVYEYSRKMMM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 22/88 (25%)
Mito_carr 105..202 CDD:395101 27/99 (27%)
Mito_carr 214..303 CDD:395101
Slc25a2NP_001099622.1 Mito_carr <1..58 CDD:395101
Mito_carr 67..162 CDD:395101 22/94 (23%)
Mito_carr 169..260 CDD:395101 27/99 (27%)
Blue background indicates that the domain is not in the aligned region.

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