DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc-25A32

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_495746.1 Gene:slc-25A32 / 186841 WormBaseID:WBGene00010459 Length:296 Species:Caenorhabditis elegans


Alignment Length:303 Identity:68/303 - (22%)
Similarity:137/303 - (45%) Gaps:26/303 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVR----STRQVIKEIVLGEGFQSLYRGLG 75
            |:.|.:.|..||..:....:|.|.::.|....|...:|    |....:::||..||.:.||:|..
 Worm     8 NYEHLIGGLCGGVTSTVVCHPFDLLKIRFSANEGSSLRPQYSSYADAVRKIVRVEGVRGLYQGWT 72

  Fly    76 PVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPFWVVNTRLRMR 140
            |.|....:|..:||..:::|:........:......:|:.|.|:|...:..|.|.|:..|||.::
 Worm    73 PSLIGASLSWGLYFQWYNSLRTKIYENFSTGSKLANNLISGCISGSAIMCITNPIWLTKTRLCLQ 137

  Fly   141 NVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVSNPALQFMMYEMLKRNIMRFTG 205
                ..::.:|.|..:::.||...::||..||:.|.:..::..::.|:|...|..:.....:..|
 Worm   138 ----YENQQSKKYAGMMDCLKKTVKQEGFFGLYRGFVTGVIGTTHGAVQIAAYSWIIDKRCQSQG 198

  Fly   206 ----GEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELM 266
                ..:....:....:.:|..||.:|:|.|:::|:.:..:.:|.....|:              
 Worm   199 LPKDSFLSQTDYVIASSTSKVLATTITFPYQVLRTRMQDHNTDSRGVWKTT-------------- 249

  Fly   267 ISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGM 309
            :..:.::||.||::|.....::.:..|.:.|:.||.:...|||
 Worm   250 LKTIHNEGIGGLWKGCLIANVRQLPAAVVTFLTYENVKRLVGM 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 23/84 (27%)
Mito_carr 105..202 CDD:395101 22/96 (23%)
Mito_carr 214..303 CDD:395101 18/88 (20%)
slc-25A32NP_495746.1 Mito_carr 5..100 CDD:395101 24/91 (26%)
Mito_carr 104..189 CDD:395101 22/88 (25%)
Mito_carr 210..289 CDD:395101 18/92 (20%)

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