DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and Rim2

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_061510630.1 Gene:Rim2 / 1271244 VectorBaseID:AGAMI1_009555 Length:392 Species:Anopheles gambiae


Alignment Length:394 Identity:78/394 - (19%)
Similarity:145/394 - (36%) Gaps:131/394 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVR---STR-------------------- 55
            ::|:|..:|...|........||:.|::|||...:..:.   |||                    
Mosquito     7 ESFIHLFAGGIAGTAGAVVTCPLEVVKTRLQSSSSSFIHAAASTRHAALAADGGKLTDHHHVRHV 71

  Fly    56 --------------------------------------------------------QVIKEIVLG 64
                                                                    |.:|.||..
Mosquito    72 SATVNSASSAADRHHSAARHQQSRVCASTILTRRRPSILAIPQCGLSTSVQSISIWQCLKHIVQT 136

  Fly    65 EGFQSLYRGLGPVLQSLCISNFVYFYTFHALK-AVASGGSPSQHSALKDLLLGSIAGIINVLTTT 128
            ||.::|::||||.:..:..|..:||..:...| ::.:.|....:|.|..:|..|.||.::...|.
Mosquito   137 EGSRALFKGLGPNIVGVAPSRAIYFCAYSKTKNSLNTVGIIPANSPLVHILSASCAGFVSSTATN 201

  Fly   129 PFWVVNTRLRM----RNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLMLVSNPALQ 189
            |.|.:.||:::    |...|             |.::.:.|.:|:.|.:.|...|.:.:|...:.
Mosquito   202 PIWFIKTRMQLDSNARMTVG-------------ECVRRIYESQGVRGFYKGITASYVGISETVIH 253

  Fly   190 FMMYEMLKRNIMRF---------------TGGEMGS-----LSFFFIGAIAKAFATVLTYPLQLV 234
            |::||.||:.::..               ..||.|.     |.|...||.:|..|:|:.||.::.
Mosquito   254 FVIYEALKKKLLELRQSSPAAKALASGDAAAGEGGKTSRDFLEFMAAGATSKTIASVVAYPHEVA 318

  Fly   235 QTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMA 299
            :|:.|....              :..:..:.::::.:.:|..||:|||..::::.:...|:|...
Mosquito   319 RTRLREEGN--------------KYRNFWQTLLTVWKEEGKAGLYRGLGTQLVRQIPNTAIMMAT 369

  Fly   300 YEKI 303
            ||.:
Mosquito   370 YEAV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 27/159 (17%)
Mito_carr 105..202 CDD:395101 25/100 (25%)
Mito_carr 214..303 CDD:395101 19/88 (22%)
Rim2XP_061510630.1 None

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