DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and SLC25A25

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001317917.1 Gene:SLC25A25 / 114789 HGNCID:20663 Length:515 Species:Homo sapiens


Alignment Length:302 Identity:68/302 - (22%)
Similarity:139/302 - (46%) Gaps:34/302 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HAVSGAAGGCIAMSTFYPLDTVRSRLQLEEA-----GDVRSTRQVIKEIVLGEGFQSLYRGLGPV 77
            |.|:|...|.::.:...|||.::..:|:..:     |.|....|:|:|    .|.:||:||.|..
Human   235 HLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMGIVGGFTQMIRE----GGARSLWRGNGIN 295

  Fly    78 LQSLCISNFVYFYTFHALKAVASGGSPSQHSALKD-LLLGSIAGIINVLTTTPFWVVNTRLRMRN 141
            :..:...:.:.|..:..:|.:.  ||..:...:.: |:.||:||.|...:..|..|:.||:.:|.
Human   296 VLKIAPESAIKFMAYEQIKRLV--GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRK 358

  Fly   142 VAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM-LVSNPALQFMMYEMLKRNIMR--- 202
            ..        .|..:|:..:.:..:||:|..:.|.:|::: ::....:...:||.||...::   
Human   359 TG--------QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYA 415

  Fly   203 FTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMI 267
            ....:.|.......|.::.....:.:|||.||:|:.:.:: ..:..|..:..|         |..
Human   416 VNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQA-SIEGAPEVTMSS---------LFK 470

  Fly   268 SILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVGM 309
            .||:.:|..||:|||....::.:...::.::.||.:..|:|:
Human   471 HILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 20/82 (24%)
Mito_carr 105..202 CDD:395101 22/98 (22%)
Mito_carr 214..303 CDD:395101 20/88 (23%)
SLC25A25NP_001317917.1 FRQ1 49..189 CDD:444056
PTZ00169 237..491 CDD:240302 63/277 (23%)
Blue background indicates that the domain is not in the aligned region.

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