DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a47

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_004917228.1 Gene:slc25a47 / 100496270 XenbaseID:XB-GENE-6041480 Length:293 Species:Xenopus tropicalis


Alignment Length:316 Identity:72/316 - (22%)
Similarity:130/316 - (41%) Gaps:68/316 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLEEAGD-----VRSTRQVIKEIVLGEGFQSLYRGLGPVLQ 79
            ::||.||...:...||||||:.|:|.::..:     ||||.::       |.....::|:...:.
 Frog     5 IAGALGGACGVMVGYPLDTVKVRIQTQKNYNGIWHCVRSTYKM-------ERVSGFFKGVSMPMS 62

  Fly    80 SLCISNFVYFYTFH-------ALKAVASGGSPSQHSALKDLLL-GSIAGIINVLTTTPFWVVNTR 136
            .:.:|:.:.|..:.       .||...:...||:.    |:.| |..||...:|.::|..:...|
 Frog    63 MVSVSSSIVFGVYRNVLRNLCK
LKYGTTAVKPSKF----DIFLSGYAAGGAQILVSSPADMAKVR 123

  Fly   137 LRMRNVAGTSDEVNKHYKNLLEGLKY---------VAEKEGIAGLWSGTIPSLML--VSNPALQF 190
            |:.:.....|...     :||.|.||         :.::||..||:.|: .:||.  ..:.|..|
 Frog   124 LQTQMCPPNSTTC-----SLLTGPKYSGPINCLLTIVKEEGFLGLYKGS-SALMFRDCHSFATYF 182

  Fly   191 MMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQ--------TKQRHRSKESDS 247
            :.|.:|:..::.|.......:...|.|..|...|..:..|:.:::        ||||:|      
 Frog   183 LSYAILREWLL
PFEQSHSELIGVLFAGGFAGVVAWGIATPMDVIKSRLQVDGVTKQRYR------ 241

  Fly   248 KPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303
                         ..:..:...::.:||..||:||....|:......::|:.||.|
 Frog   242 -------------GVIHCITESVRQEGITVLFKGLSLNCLRAFPVNMVVFLTYEAI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 20/87 (23%)
Mito_carr 105..202 CDD:395101 27/108 (25%)
Mito_carr 214..303 CDD:395101 20/96 (21%)
slc25a47XP_004917228.1 Mito_carr 1..84 CDD:395101 20/85 (24%)
Mito_carr 100..193 CDD:395101 25/98 (26%)
Mito_carr 198..286 CDD:395101 21/106 (20%)

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