DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and slc25a18

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001096428.1 Gene:slc25a18 / 100125036 XenbaseID:XB-GENE-956024 Length:304 Species:Xenopus tropicalis


Alignment Length:194 Identity:47/194 - (24%)
Similarity:92/194 - (47%) Gaps:11/194 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTI 177
            |:.|.|||::.|....|..:..|||:.:..:|.       |:.:.:.|......||..|::.|..
 Frog    11 LINGGIAGLVGVTCVFPIDLAKTRLQNQQGSGI-------YRGMFDCLIKTVRSEGFFGMYRGAA 68

  Fly   178 PSLMLVS-NPALQFMMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHR 241
            .:|.||: ..|::....:.. ||::...|.|:..|.....|..|.....|:|.|:::::.:.:..
 Frog    69 VNLTLVTPEKAIKLAANDFF-RNLLARDGKELTLLKEMLAGCGAGTCQVVVTSPMEMLKIQLQDA 132

  Fly   242 SKESDSKPSTSAG--STPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303
            .:.:..|.....|  :.|:..|.|.:..::|:.|||.|:::||.|.:|:.|..:.:.|..:..:
 Frog   133 GRLATQKAFAEEGLAAIPKRPSALLIATNLLRTQGISGVYKGLGATLLRDVPFSVIYFPLFANL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101
Mito_carr 105..202 CDD:395101 23/89 (26%)
Mito_carr 214..303 CDD:395101 21/90 (23%)
slc25a18NP_001096428.1 PTZ00169 1..273 CDD:240302 47/194 (24%)
Mito_carr 3..96 CDD:395101 23/92 (25%)
Blue background indicates that the domain is not in the aligned region.

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