DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and col6a3

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_017213295.1 Gene:col6a3 / 556874 ZFINID:ZDB-GENE-070501-8 Length:10986 Species:Danio rerio


Alignment Length:197 Identity:47/197 - (23%)
Similarity:61/197 - (30%) Gaps:74/197 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KCGPGLPG-----GEYGLP-------QIGANGLSEE---------YGPPEAYERNDFALGGPGVL 385
            |.|||.||     |..|.|       :.|::||:.|         .||          :|.|||.
Zfish  9928 KGGPGEPGRRGSDGRRGPPGQAGAAGRPGSDGLAGEPGIGGSRGPAGP----------IGAPGVR 9982

  Fly   386 PPAAYPDPRHPASDATGAYSENQPDVV--------PSPQAQTSAAVPTADSGTVSGPASSQSPQP 442
            .....|.||.|......|..:.:...|        |.|:.             |:||...:. :|
Zfish  9983 GEDGNPGPRGPGGQPGPAGEKGRRGAVGRKGEPGEPGPKG-------------VTGPFGPRG-EP 10033

  Fly   443 QPTGSNELGLPPPP----------LPGQSGQYSTVKRKDDLSAGGNLVSLGGRPRSVEGLDDLRG 497
            ...|.:..|.|.|.          .||..|:           ||....:.|..||...|.....|
Zfish 10034 GEDGRDGFGFPGPKGRKGDEGFPGFPGPKGE-----------AGDPGTNGGPGPRGNNGQRGTSG 10087

  Fly   498 VR 499
            ||
Zfish 10088 VR 10089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 1/2 (50%)
PHA03378 <339..494 CDD:223065 44/190 (23%)
col6a3XP_017213295.1 vWFA 2..145 CDD:320736
vWFA 182..345 CDD:320736
vWFA 382..544 CDD:320736
vWFA 581..744 CDD:320736
vWFA 781..944 CDD:320736
vWFA 981..1144 CDD:320736
vWFA 1181..1343 CDD:320736
vWFA 1380..1543 CDD:320736
vWFA 1580..1743 CDD:320736
vWFA 1780..1943 CDD:320736
vWFA 1980..2142 CDD:320736
vWFA 2179..2342 CDD:320736
vWFA 2379..2542 CDD:320736
vWFA 2579..2742 CDD:320736
vWFA 2779..2941 CDD:320736
vWFA 2978..3141 CDD:320736
vWFA 3178..3341 CDD:320736
vWFA 3378..3541 CDD:320736
vWFA 3578..3740 CDD:320736
vWFA 3777..3940 CDD:320736
vWFA 3977..4140 CDD:320736
vWFA 4177..4340 CDD:320736
vWFA 4377..4539 CDD:320736
vWFA 4576..4739 CDD:320736
vWFA 4776..4939 CDD:320736
vWFA 4976..5139 CDD:320736
vWFA 5176..5338 CDD:320736
vWFA 5375..5538 CDD:320736
vWFA 5575..5738 CDD:320736
vWFA 5775..5938 CDD:320736
vWFA 5975..6137 CDD:320736
vWFA 6174..6337 CDD:320736
vWFA 6374..6537 CDD:320736
vWFA 6574..6737 CDD:320736
vWFA 6774..6936 CDD:320736
vWFA 6973..7136 CDD:320736
vWFA 7173..7336 CDD:320736
vWFA 7373..7536 CDD:320736
vWFA 7573..7735 CDD:320736
vWFA 7772..7935 CDD:320736
vWFA 7972..8135 CDD:320736
vWFA 8172..8335 CDD:320736
vWFA 8372..8534 CDD:320736
vWFA 8571..8734 CDD:320736
vWFA 8771..8934 CDD:320736
vWFA 8977..9140 CDD:320736
vWFA 9177..9340 CDD:320736
VWA 9380..9551 CDD:306576
Collagen 9853..9919 CDD:189968
Collagen 9907..9984 CDD:189968 19/65 (29%)
Collagen 9962..10040 CDD:189968 20/101 (20%)
Collagen 10013..10103 CDD:189968 22/102 (22%)
VWA 10143..>10278 CDD:306576
VWA 10360..10542 CDD:306576
Kunitz_BPTI 10834..10887 CDD:278443
KU 10918..10971 CDD:238057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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