DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and Col6a5

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_038938539.1 Gene:Col6a5 / 501047 RGDID:1565804 Length:2637 Species:Rattus norvegicus


Alignment Length:255 Identity:59/255 - (23%)
Similarity:75/255 - (29%) Gaps:91/255 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 PEPKCGPGLPGGEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRH-------- 395
            |:...||..|.|:.|.|  |..|...|.|.|          ||||.|.|     |.|        
  Rat  1635 PQGSPGPVGPRGDIGRP--GFGGRKGEPGVP----------GGPGPLGP-----PGHRGEQGDYG 1682

  Fly   396 -PASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSNEL--------- 450
             ||...||......|...|....|...|   .|.|...||.        |.|...|         
  Rat  1683 IPAYGQTGRKGVKGPTGFPGDPGQKGDA---GDPGIPGGPG--------PKGFKGLTLSQGLKGG 1736

  Fly   451 -GLP----PPPLPGQSGQYSTVKRKDDLSAGGNLVS--------LGGRP-----------RSVEG 491
             |||    ||...|..|           :||..:.|        ....|           ..|..
  Rat  1737 SGLPGSQGPPGRRGPKG-----------TAGQPIYSPCELIQFLRNNSPCWKEKCPVYPTELVFA 1790

  Fly   492 LDDLRGVRRR-----RDTMDIVVKPQRIYKRNAQEMTDVNTSRIIQVVAPGDVNFALNSN 546
            ||...|...|     |||:..::....|.:.|...     .:|::.|....|:::.:..:
  Rat  1791 LDQSFGTSERRFNETRDTIASIIDDLNIRENNCPV-----GARVVVVSYDSDISYLIRGS 1845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 1/5 (20%)
PHA03378 <339..494 CDD:223065 48/196 (24%)
Col6a5XP_038938539.1 vWFA 31..193 CDD:412136
vWFA 263..417 CDD:412136
vWA_collagen 469..618 CDD:238749
vWA_collagen 655..816 CDD:238749
VWA 842..1012 CDD:395045
VWA 1033..1200 CDD:395045
Collagen 1426..1483 CDD:396114
Collagen 1495..1546 CDD:396114
Collagen 1553..1610 CDD:396114
Collagen 1586..1652 CDD:396114 7/18 (39%)
Collagen 1634..1753 CDD:396114 41/145 (28%)
VWA 1787..>1928 CDD:395045 13/64 (20%)
vWFA_subfamily_ECM 1991..2165 CDD:238727
vWFA_subfamily_ECM 2318..2496 CDD:238727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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