DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and matn3b

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001012385.1 Gene:matn3b / 497645 ZFINID:ZDB-GENE-050221-9 Length:478 Species:Danio rerio


Alignment Length:146 Identity:37/146 - (25%)
Similarity:48/146 - (32%) Gaps:55/146 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 PKCGPGLPGGEYGLPQIGANGLSEEY-------------------GPPEAYERNDFALGGPGVLP 386
            |...|.:||....: .|||:|.:..:                   |||..|.|       |..:.
Zfish    41 PHISPNIPGHGNSI-NIGAHGFNPRFYSYHHPNPHQHHPQRPPWKGPPFIYHR-------PVPIQ 97

  Fly   387 PAAYPDPRHPASDATGAYSENQPDVVPS-PQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSNEL 450
            |.....|..||          :| :||| |:.......|     ||..|.     :|.||     
Zfish    98 PVRPISPVQPA----------RP-IVPSLPRIPVVLPAP-----TVPMPV-----KPIPT----- 136

  Fly   451 GLPPPPLPGQSGQYST 466
             |||||.|......:|
Zfish   137 -LPPPPPPSTQATTTT 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 1/3 (33%)
PHA03378 <339..494 CDD:223065 37/146 (25%)
matn3bNP_001012385.1 vWFA 201..422 CDD:294047
Matrilin_ccoil 436..477 CDD:287378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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