DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dyl and nompA

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster


Alignment Length:675 Identity:132/675 - (19%)
Similarity:208/675 - (30%) Gaps:248/675 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IESAALPLEHRAGYG---PPAPIYGAPQGPLSTGATNDVSEEAWPLASTNDSPQIKHLQ------ 88
            ::...|||   .|.|   ||.|..|...|.:..|...:......|:....:|...|.:.      
  Fly   866 LDDRPLPL---PGLGLSHPPTPYGGGGAGHVGVGVGVNSGPPRPPITRCEESDNFKQIAARHKMR 927

  Fly    89 -------------VQCEKTHMRVNIEFDRPFYGMIFSKGFYSD---------PHC---------- 121
                         :|||:..:.......|.|.....:...|.|         |:|          
  Fly   928 RHFVRRALIVPSLIQCERECIESRDFVCRSFNYRDSAASGYEDRDRDRDRDSPNCELSDRDSREL 992

  Fly   122 -VHLKPGTGHLSATFEIFLNSCG--------MTSSANHNAAGYGAPTPSG------SY------- 164
             :| .|||...| .::.:..|.|        :|.:.|.....:...||.|      :|       
  Fly   993 DIH-DPGTFDAS-NYDFYERSIGRSDGECMDVTQTCNEEGMEFTIRTPEGFLGRIYTYGFYDRCF 1055

  Fly   165 ------------------------------VENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAV 199
                                          :.|.:::|:...||...|:...|.|.:....|..|
  Fly  1056 FRGNGGTVNVLRLSGPQGYPDCGTQRYGDTLTNIVVVQFSDNVQTSRDKRYNLTCIFRGPGEAVV 1120

  Fly   200 TF--------RPFQVDMLHAVTANFLGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKD 256
            :.        .|..::.|.|  .|.|...::..:..|       ...:..:.:|..:|..|..:|
  Fly  1121 SSGYIGAGSGSPIPIEYLPA--ENTLSSKVRLSILYQ-------GRPTTTIAVGDPLTFRLEAQD 1176

  Fly   257 DENKF-DMLVRNCVAHD---GKRAPIQLVDQNGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAF 317
            ..|.. |:...|.||.|   |:  .|||:|:.||.|.|.:..:..|::: |.:..    |.|.||
  Fly  1177 GYNHVTDIFATNVVARDPYSGR--SIQLIDRFGCPVDPFVFPELDKLRD-GDTLE----ARFNAF 1234

  Fly   318 KFPDSMNVHFQCVIQVCRYNCPEPKCGPGLPGGEYGLPQIGANGLS---EEYGPPEAYERNDFAL 379
            |.|:|..:.|:..::.||..|....| || |.|... |..|....|   .|...|||     .||
  Fly  1235 KIPESNFLVFEATVRSCREGCQPAYC-PG-PAGRQE-PSFGRRRRSLNTTEIPEPEA-----LAL 1291

  Fly   380 GGPGVLPPAAYPDPRHPASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQP 444
            .|...|                              :|.|...|...:|.|||..          
  Fly  1292 EGSSQL------------------------------EASTLDEVTVVNSTTVSAT---------- 1316

  Fly   445 TGSNELGLPPPPLPGQSGQYSTVKRKDDLSAGGNLVSLGGRPRSVEGLDDLRGVRRRRDTMDIVV 509
                   |...||                    |...||.:.:..|..:.:|.:....:|.:.:.
  Fly  1317 -------LGQVPL--------------------NETQLGEKTKETEEPEQVREMIEVFETREEIE 1354

  Fly   510 KPQRIYKRNAQEMTDVNTSRIIQVVAPGDVNFALNSNASNETVVIQSARSADAETICMSVPSFVG 574
            |..  |.|              ::|||                         .||:||:...:.|
  Fly  1355 KES--YPR--------------KLVAP-------------------------VETVCMTPAEYHG 1378

  Fly   575 ---GLVMLLLVLAVASLVAAFLFVR 596
               .:::|:::|...:|||...:.|
  Fly  1379 LITAIILLMILLFSITLVAGLGYRR 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 70/337 (21%)
PHA03378 <339..494 CDD:223065 30/157 (19%)
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PAN_AP_HGF 914..1011 CDD:238532 16/98 (16%)
ZP 1025..1264 CDD:214579 55/256 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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