DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dyl and Matn4

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001100009.1 Gene:Matn4 / 296358 RGDID:1309732 Length:624 Species:Rattus norvegicus


Alignment Length:484 Identity:83/484 - (17%)
Similarity:138/484 - (28%) Gaps:191/484 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EFDRPFYGMIFSKGFYSDPHCVHLKPGTGHL----SATFEIFLNSCGMTSSANHNAAGYGAPTPS 161
            ||...|.|.:..|..     |..|:.|..||    ..||....||....:..|.|..........
  Rat   206 EFGLQFQGRLCGKDL-----CAELEHGCQHLCVNAPGTFYCACNSGYKLAPDNRNCLAIDLCAEG 265

  Fly   162 GSYVENTIIIQYDPY---------VQEVWDQARKLRCTWYDFYEKAVTFRPF-QVDMLHAVTANF 216
            ....|:..:...|.|         :|:  ||.   .|       :|:.:..| .....|...:..
  Rat   266 THGCEHLCVSSVDSYFCRCRAGFALQQ--DQR---SC-------RAIDYCSFGNHSCQHECVSTL 318

  Fly   217 LGDNLQCWMQIQVGKGPWASEVSGIVKIGQTMTMVLAIKDDENKFDM----------LVRNCVAH 271
            :|...:|            .|...::..|::    ..::|..|..|.          |..:|:..
  Rat   319 VGPQCRC------------REGHDLLPDGRS----CQVRDFCNGVDHGCEFQCVSEGLSFHCLCP 367

  Fly   272 DGKRAP----------------IQLVDQNGCVVRPKIMSKFQKIKNFGPSASVVSFAYFQAFKFP 320
            :|:|..                :.|||.:.. |||:   .|:.:|.|                  
  Rat   368 EGRRLQADGKSCDRCREGHVDLVLLVDGSKS-VRPQ---NFELVKRF------------------ 410

  Fly   321 DSMNVHFQCVIQVCRYNCPEPKCGPGLPGGEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVL 385
                     |.|:..:....|:      |...||.|..:.            .|.:|.||..|. 
  Rat   411 ---------VNQIVDFLDVSPE------GTRVGLVQFSSR------------VRTEFPLGRYGT- 447

  Fly   386 PPAAYPDPRHPASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPA----------SSQSP 440
                       |::.                .|...||...:.||::|.|          ..|..
  Rat   448 -----------AAEV----------------KQAVLAVEYMERGTMTGLALRHMVEHSFSEVQGA 485

  Fly   441 QPQPTGSNELGLPPPPLPGQSGQYSTVKRKDDLSA-------GGNLVSLGGRPRSVEGLDDLRGV 498
            :|:......:||          .::..:.:||:|.       .|.::...|..::||  ::||.:
  Rat   486 RPRDLNVPRVGL----------VFTDGRSQDDISVWAARAKEEGIVMYAVGVGKAVE--EELREI 538

  Fly   499 RRRRDTMDIVVKPQRIYKRNAQEMTDVNT 527
            ......:.:...|            |.||
  Rat   539 ASEPSELHVSYSP------------DFNT 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 49/283 (17%)
PHA03378 <339..494 CDD:223065 29/171 (17%)
Matn4NP_001100009.1 vWA_Matrilin 33..255 CDD:238752 15/53 (28%)
FXa_inhibition 262..297 CDD:291342 6/39 (15%)
FXa_inhibition 303..338 CDD:291342 6/50 (12%)
FXa_inhibition 344..379 CDD:291342 6/34 (18%)
vWFA 385..621 CDD:294047 46/272 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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