DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dyl and cutl-4

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_507484.3 Gene:cutl-4 / 189246 WormBaseID:WBGene00012304 Length:469 Species:Caenorhabditis elegans


Alignment Length:612 Identity:124/612 - (20%)
Similarity:205/612 - (33%) Gaps:225/612 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SHIESAALPLEHRAGYGPPAPIYGAPQGPLSTGATNDVSEEAWPLASTNDSPQIKHLQVQCEKTH 95
            |||:||.:|   |...|    |.|.|                               :|.|:...
 Worm    14 SHIQSAKVP---RIQNG----IVGEP-------------------------------EVICDIKQ 40

  Fly    96 MRVNIEFDRPFYGMIFSKGFYSDPHCVHLKPGTGHLSATFEIFL---NSCGMTSSANHNAAGYGA 157
            :|:.:...:.|.|.::||||:....|......|.:   :.||.|   :.||:......|      
 Worm    41 IRITMRTSQSFIGNLYSKGFFHKSECRVRGNSTAN---SIEIVLPVDSDCGIRRKRMMN------ 96

  Fly   158 PTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDMLHAVTANFLGDNLQ 222
              |.|..::..:|:.:.|......|::..::|. |...|:.|| ....|.|   ..|:.|..::|
 Worm    97 --PRGILLDTIVILMFHPVFLTQTDRSYHVQCQ-YTESERTVT-NALDVSM---QPASELPQSIQ 154

  Fly   223 ---------CWMQI--QVGKGPWASEVSGIVKIGQTMTMVLAIKDDENK--FDMLVRNCVAHDGK 274
                     |..::  :..:||..|..:    :|..:....:. |..||  :.|.|.:||..||:
 Worm   155 QLNDDSAPVCKYEVLMENAQGPPLSHAT----VGDLVYHKWSC-DGNNKEMYCMTVHSCVVDDGQ 214

  Fly   275 RAPIQLVDQNGCVVRPKIMSKF---QKIKNFGPSASVVSFAYFQAFKFPDSMNVHFQCVIQVCRY 336
            ....:|||::||.:...|:.:.   :|....|..:||        |||.|...|.|.|:|:|...
 Worm   215 GFGQKLVDEHGCTLDAFILKELEYNEKELEAGQMSSV--------FKFADKPTVFFSCMIRVEMK 271

  Fly   337 NCPEPKCGPGLPGGEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRHPASDAT 401
            ...|..|                                        |:|.....:         
 Worm   272 ESAEMPC----------------------------------------VIPTEVCKN--------- 287

  Fly   402 GAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSNELGLPPPPLPGQSGQYST 466
                      :||.:.|.   :.......||.......|:||    |...|.      :|.::||
 Worm   288 ----------LPSSKMQN---LDVMTDRKVSDDIPPGFPRPQ----NNTKLQ------KSQKFST 329

  Fly   467 VKRKDDLSAGGNLVSLGGRPRSVEGLDDLRGVRRRRDTMDIV-----VKPQRIYKR-----NAQE 521
                |.:::..:.        |.:.|||     ...|.:|.:     |...|:.:|     |.:.
 Worm   330 ----DAMTSNSDY--------SADFLDD-----ELEDEVDKMSRIPSVTMNRLIRRDVAGGNTKL 377

  Fly   522 MTDVNTSRIIQVVAP----------------GDVNFALNSNASNETVVIQSARSADAETICMSVP 570
            :.||:      |.||                |:..|.:.:||||:              :|.:..
 Worm   378 LADVD------VAAPSVNVQDLPESEVGNPTGNRKFHVPTNASND--------------VCFTRT 422

  Fly   571 SFVGGLVMLLLVLAVASLVAAFLFVRV 597
            :    |::.||:||...:|...|...|
 Worm   423 N----LILSLLILAALGIVTISLMYLV 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 66/273 (24%)
PHA03378 <339..494 CDD:223065 20/154 (13%)
cutl-4NP_507484.3 ZP 35..278 CDD:214579 65/271 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107918
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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