DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dyl and cut-4

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_496242.2 Gene:cut-4 / 184037 WormBaseID:WBGene00008482 Length:507 Species:Caenorhabditis elegans


Alignment Length:555 Identity:137/555 - (24%)
Similarity:211/555 - (38%) Gaps:134/555 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSPQIKHLQVQCEKTHMRVNIEFDRPFYGMIFSKGFYSDPHCVHLKPG-TGHLSATFEIFLNSCG 143
            |:..|...:|.||...:.:..:....|.|.:|.||:.|:|.|:.:..| |||   .||:..:|||
 Worm    32 DNSLIGEPEVVCETASISLLFKTRNSFNGKVFVKGYVSEPSCMTVGDGKTGH---RFEVRHDSCG 93

  Fly   144 MTSSANHNAAGYGAPTPSGSYVENTIIIQYDPYVQEVWDQARKLRCTWYDFYEKAVTFRPFQVDM 208
            :......|          |..:..|:||.:........|:|.::.|    ||.:........|| 
 Worm    94 VRRQREIN----------GVVISATVIISFHSIFITKIDRAYRVSC----FYVEGTKKVHNHVD- 143

  Fly   209 LHAVTANFLGDNLQ---CWMQI--QVGKGPWASEVSGIVKIG-QTMTMVLAIKDDENKFDMLVRN 267
            :.|:|...|....|   |..:|  :.|..|     ....:|| |.......:.:.||.:.|.|.:
 Worm   144 ISALTTQLLESETQLPVCRYEILNEAGGSP-----IKYARIGDQVYHKWTCVAELENVYCMKVHS 203

  Fly   268 CVAHDGKRA-PIQLVDQNGCVVRPKIMSKFQKIKNF--GPSASVVSFAYFQAFKFPDSMNVHFQC 329
            |..:||:.. |:.::|.|||.|...|:...:...:.  |..|.|        |||.|...::|.|
 Worm   204 CTVYDGQGGPPVTVIDANGCSVDGVILQNLEYTSDLTAGKLAPV--------FKFADKAGLYFNC 260

  Fly   330 VIQV----CRYNC--PEPKCGPGLPGGEYGL-PQIGANGLSEEYGPPEAYERNDFALGGPGVLPP 387
            .||:    ..|.|  .:|:|    |..:|.: |.......:|.| |.:::|.     |.|  ..|
 Worm   261 QIQLTIKDVNYGCSNTQPQC----PTSQYVVEPAQKTTETAEPY-PYDSHES-----GYP--TRP 313

  Fly   388 AAYPDPRHPASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSN-ELG 451
            |.||       .|:..|        |.|..|..|:.|:             ||.|.|.|:: :.|
 Worm   314 ANYP-------VASSRY--------PIPTTQAPASYPS-------------SPAPPPPGADIDNG 350

  Fly   452 LP-PPPLPGQSGQY--STVKRKDDLSAGGNLVSLGGRPRSVEGLDDLRGVRRRRDTMDIVVKPQR 513
            .| |.|:      |  .|.:...|...|.|...   :|.:........||.            .|
 Worm   351 YPEPQPI------YIAETPENAYDGIVGFNDTE---QPFTTSAAYTEDGVY------------SR 394

  Fly   514 IYKRNAQEMTD-VNTSRIIQVVAPGDVN--------FALNSNASNETV---------VIQSARSA 560
            :.|||..|.|: :|.|...:.|..||::        |.|......||.         .::.||::
 Worm   395 LIKRNVVESTEQINASNKKRPVTVGDIDLPERGILVFGLEEMEDGETTNAGDHGATRALREARNS 459

  Fly   561 DAETICMSVPSFVGGLVMLLLVLAVASLVAAFLFV 595
            ..:| |.|.....  ..::||.|..|:.|..|:.:
 Worm   460 QEKT-CFSTSRMY--FTLILLCLLFATTVVVFIVI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 71/270 (26%)
PHA03378 <339..494 CDD:223065 37/159 (23%)
cut-4NP_496242.2 ZP 43..283 CDD:214579 72/274 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 78 1.000 Inparanoid score I3815
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14807
orthoMCL 1 0.900 - - OOG6_107918
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

Return to query results.
Submit another query.