DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and COL6A6

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_011510726.1 Gene:COL6A6 / 131873 HGNCID:27023 Length:2279 Species:Homo sapiens


Alignment Length:334 Identity:70/334 - (20%)
Similarity:112/334 - (33%) Gaps:114/334 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 GPGLPGGEYG-LPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRH-PASDATGAYSE 406
            ||..||||.| ..::|:.|...|.|.          ||..|.:   .:|.||. ..:|.:..|..
Human  1622 GPPGPGGEAGNQGRLGSQGNKGEPGD----------LGEKGAV---GFPGPRGLQGNDGSPGYGS 1673

  Fly   407 NQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTG-------------SNELGLP--PPP 456
            .........:.....:.|..:.|...||..        ||             ..|:|.|  |.|
Human  1674 VGRKGAKGQEGFPGESGPKGEIGDPGGPGE--------TGLKGARGKMISAGLPGEMGSPGEPGP 1730

  Fly   457 LPGQSG--------QYST---VKRKDDLSAGGNLVSLGGRPRS-------VEGLDDLRGV----- 498
             ||:.|        .:||   ::...|.|.|.:     |:|..       |..||..|.|     
Human  1731 -PGRKGVKGAKGLASFSTCELIQYVRDRSPGRH-----GKPECPVHPTELVFALDHSRDVTEQEF 1789

  Fly   499 RRRRDTMDIVVKPQRI-----------------------------YKRNAQEMTDVNTSRIIQVV 534
            .|.::.|..:|:..::                             ||: :|.:.::.|....:..
Human  1790 ERMKEMMAFLVRDIKVRENSCPVGAHIAILSYNSHARHLVRFSDAYKK-SQLLREIETIPYERSS 1853

  Fly   535 APGDVNFA---LNSNASNETV----------VIQSARSADAETICMSVPSFVGGLVMLLLVLA-- 584
            |..::..|   ::.|....|:          ...|.:||||.:|..:...| |.|.::.:|:.  
Human  1854 ASREIGRAMRFISRNVFKRTLPGAHTRKIATFFSSGQSADAHSITTAAMEF-GALEIIPVVITFS 1917

  Fly   585 -VASLVAAF 592
             |.|:..||
Human  1918 NVPSVRRAF 1926

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity