DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and col21a1

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002934910.1 Gene:col21a1 / 100497739 XenbaseID:XB-GENE-952329 Length:957 Species:Xenopus tropicalis


Alignment Length:169 Identity:48/169 - (28%)
Similarity:55/169 - (32%) Gaps:49/169 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 QVCRYNCPEPKCGPGLPG-----------GEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVL 385
            |.|. .|...:..|||||           |..|||  |.||.|...|.|          |.||: 
 Frog   815 QNCN-QCKTQEGSPGLPGSPGPVGPDGPRGHPGLP--GRNGFSGLVGQP----------GVPGI- 865

  Fly   386 PPAAYPDPRHP--ASDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQPQPTGSN 448
                 |.|:.|  .|.|.|    |:.|..|.||.......|....|.  |......||..|....
 Frog   866 -----PGPKGPPGKSGAKG----NKGDSEPGPQGAPGVPGPVGLPGI--GKDGRTGPQGPPGREG 919

  Fly   449 ELGLPPPPLPGQSGQ---------YSTVKRKDDLSAGGN 478
            :.|  ||...|..|.         |..:.|:|....|.|
 Frog   920 DRG--PPGAQGSPGDAGICDPSLCYGAIMRRDPFRKGPN 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 3/12 (25%)
PHA03378 <339..494 CDD:223065 45/162 (28%)
col21a1XP_002934910.1 vWFA 34..215 CDD:294047
YfbK 37..323 CDD:225187
LamG 230..412 CDD:304605
SSDP 447..740 CDD:282372
Collagen 452..510 CDD:189968
Collagen 485..542 CDD:189968
Collagen 560..617 CDD:189968
Collagen 590..648 CDD:189968
Collagen 644..701 CDD:189968
Collagen 719..778 CDD:189968
Collagen 887..>934 CDD:189968 13/50 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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