DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and col21a1

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002664126.4 Gene:col21a1 / 100333837 ZFINID:ZDB-GENE-110607-3 Length:968 Species:Danio rerio


Alignment Length:161 Identity:47/161 - (29%)
Similarity:55/161 - (34%) Gaps:41/161 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KCGPGLPG--GEYGLPQIGANGLSEEYGPP----EAYERNDFALGGPGVLPPAAYP--DPRHPA- 397
            |...|:||  ||.|||  |..|.|.:.||.    |:.|.......||...|.|..|  .|.||. 
Zfish   639 KGAKGIPGDAGEMGLP--GMTGSSGQPGPKGNKGESGESGQAGPPGPEGKPGADGPSGQPGHPGM 701

  Fly   398 ---------------SDATGAYSENQPDVVPSPQAQTSAAVPTADSGTVSGPASS---------- 437
                           ..|.|...|......|.......||....:.||...|..|          
Zfish   702 PGSLGMKGQRGDTGERGADGMKGERGDSGRPGGHGLPGAAGKKGEKGTAGEPGQSGLNGHQGLPG 766

  Fly   438 QSPQPQPTG----SNELGLPPPPLP-GQSGQ 463
            |..|..|:|    |.|:|.|.||.| |:.|:
Zfish   767 QRGQTGPSGPRGQSGEIGHPGPPGPEGRPGR 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dylNP_647890.2 ZP 90..345 CDD:214579 1/2 (50%)
PHA03378 <339..494 CDD:223065 47/161 (29%)
col21a1XP_002664126.4 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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