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Protein Alignment dyl and col28a1b
DIOPT Version :9
Sequence 1: | NP_647890.2 |
Gene: | dyl / 38531 |
FlyBaseID: | FBgn0066365 |
Length: | 611 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001289178.1 |
Gene: | col28a1b / 100332225 |
ZFINID: | ZDB-GENE-160503-1 |
Length: | 1109 |
Species: | Danio rerio |
Alignment Length: | 268 |
Identity: | 63/268 - (23%) |
Similarity: | 87/268 - (32%) |
Gaps: | 77/268 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 344 GPGLPGGEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRHPASDATGAYSENQ 408
||..|.|..|.|.||..|...|.|.|.:: ||..|....||.|..|.. ..|...|..
Zfish 602 GPVGPPGPAGEPGIGIAGPKGEIGLPGSF--------GPPGLKGEGYPGPPGPPG-LPGLTGEIG 657
Fly 409 PDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQ--PQPTGSNELG-------------LPPPPLP 458
|:.:..| ||...:.|| |.|.|:..|| :.||.||
Zfish 658 PEGIGLP-----------------GPKGERGPQGSPGPAGATGLGQMGPKGSIGLTGPVGPPGLP 705
Fly 459 -----GQSGQ--YSTVKRKDDLSAGGNLVSLGGR--PRSVEGLDDLRGVRRRRDTMDIVVKPQRI 514
||.|: |..::....|:..| |.|: .|..:|....:|...|:....:...|...
Zfish 706 GEGIQGQKGEPGYQGLQGPRGLTGEG----LPGQKGDRGFQGAQGRKGEEGRQGEPGLTGPPGNA 766
Fly 515 YKRNAQEMTDVNTSRIIQVVAPGDVNFALNS----------NASNETVVIQSARSADAETICMSV 569
.|:....:| ..|:.|.:.| |......||.|:.|...|...: :
Zfish 767 GKKGEPGLT------------REDIIFLIRSICGCGRICRVNPLELVFVIDSSESVGPENFEV-I 818
Fly 570 PSFVGGLV 577
..||..|:
Zfish 819 KDFVNTLI 826
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.