DRSC/TRiP Functional Genomics Resources

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Protein Alignment dyl and col28a1b

DIOPT Version :9

Sequence 1:NP_647890.2 Gene:dyl / 38531 FlyBaseID:FBgn0066365 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001289178.1 Gene:col28a1b / 100332225 ZFINID:ZDB-GENE-160503-1 Length:1109 Species:Danio rerio


Alignment Length:268 Identity:63/268 - (23%)
Similarity:87/268 - (32%) Gaps:77/268 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 GPGLPGGEYGLPQIGANGLSEEYGPPEAYERNDFALGGPGVLPPAAYPDPRHPASDATGAYSENQ 408
            ||..|.|..|.|.||..|...|.|.|.::        ||..|....||.|..|.. ..|...|..
Zfish   602 GPVGPPGPAGEPGIGIAGPKGEIGLPGSF--------GPPGLKGEGYPGPPGPPG-LPGLTGEIG 657

  Fly   409 PDVVPSPQAQTSAAVPTADSGTVSGPASSQSPQ--PQPTGSNELG-------------LPPPPLP 458
            |:.:..|                 ||...:.||  |.|.|:..||             :.||.||
Zfish   658 PEGIGLP-----------------GPKGERGPQGSPGPAGATGLGQMGPKGSIGLTGPVGPPGLP 705

  Fly   459 -----GQSGQ--YSTVKRKDDLSAGGNLVSLGGR--PRSVEGLDDLRGVRRRRDTMDIVVKPQRI 514
                 ||.|:  |..::....|:..|    |.|:  .|..:|....:|...|:....:...|...
Zfish   706 GEGIQGQKGEPGYQGLQGPRGLTGEG----LPGQKGDRGFQGAQGRKGEEGRQGEPGLTGPPGNA 766

  Fly   515 YKRNAQEMTDVNTSRIIQVVAPGDVNFALNS----------NASNETVVIQSARSADAETICMSV 569
            .|:....:|            ..|:.|.:.|          |......||.|:.|...|...: :
Zfish   767 GKKGEPGLT------------REDIIFLIRSICGCGRICRVNPLELVFVIDSSESVGPENFEV-I 818

  Fly   570 PSFVGGLV 577
            ..||..|:
Zfish   819 KDFVNTLI 826

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity