DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT6A and krt5

DIOPT Version :9

Sequence 1:NP_005545.1 Gene:KRT6A / 3853 HGNCID:6443 Length:564 Species:Homo sapiens
Sequence 2:NP_571231.2 Gene:krt5 / 797351 ZFINID:ZDB-GENE-991110-23 Length:566 Species:Danio rerio


Alignment Length:593 Identity:348/593 - (58%)
Similarity:426/593 - (71%) Gaps:63/593 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     5 STTIRSHSSS---------------RRGFSA-NSARLPGVSRSGFSSVSVSRSRGSGGLGGACGG 53
            ||:.::.:||               |:.||: :::.:|..||   ||||..||.|.|      ||
Zfish     2 STSFKTFTSSGSMSGGMGGGMGGGIRKNFSSMSTSAVPMGSR---SSVSFRRSGGGG------GG 57

Human    54 AGFGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGA-GSGFGFGGGAGIGFG--LGGG 115
            .|||:    |.|||...|:|||    .||.||..||.:|.||. |||.|||||||.|.|  .|||
Zfish    58 GGFGA----GSGGSFSYSMGGG----GGGGGSGFGGGFGSGGGFGSGGGFGGGAGFGGGSAYGGG 114

Human   116 AGLAGGFGGPGFPVCPPGG---IQEVTVNQSLLTPLNLQIDPTIQRVRAEEREQIKTLNNKFASF 177
            ||..||||        |||   |..|||||:||.||||:|||.||.||.:|:||||||||:||||
Zfish   115 AGFGGGFG--------PGGVVPITAVTVNQNLLAPLNLEIDPNIQVVRTQEKEQIKTLNNRFASF 171

Human   178 IDKVRFLEQQNKVLETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRGM 242
            ||||||||||||||||||:|||||  .|.|.|::.:||.||.|||||||.:..|:.:|:.||:.|
Zfish   172 IDKVRFLEQQNKVLETKWSLLQEQ--TTTRSNIDAMFEAYIANLRRQLDGLGNEKMKLEGELKNM 234

Human   243 QDLVEDFKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELS 307
            |:||||||||||||||||.|.|||||.|||||||||||||||:||.|:|.||||||||:::.||.
Zfish   235 QNLVEDFKNKYEDEINKRAAVENEFVLLKKDVDAAYMNKVELEAKVDSLQDEINFLRAIFEEELR 299

Human   308 QMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHGD 372
            ::|:.|.|||||:.|||:||||:|:|:|||:||||:||.||||||||||:.|:||:|.:||::||
Zfish   300 ELQSQIKDTSVVVEMDNSRNLDMDAIVAEVRAQYEDIANRSRAEAESWYKQKFEEMQSSAGKYGD 364

Human   373 DLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKLEGLEDALQKA 437
            ||||||.|||::||||.||::||:.||.|.|||:|.||:||:|||:|:||||.:::.||||||:|
Zfish   365 DLRNTKAEIADLNRMISRLQNEIEAVKGQRANLEAQIAEAEERGELAVKDAKLRIKDLEDALQRA 429

Human   438 KQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNISVVQSTVSS------- 495
            |||:||.::|||||||||||||:|||||||||||||.|: ..|.....|.:.:|:.||       
Zfish   430 KQDMARQVREYQELMNVKLALDIEIATYRKLLEGEESRI-ASGGNTATIHIQESSSSSGGGGGGF 493

Human   496 GYGGASGVGSGLGLGGGSSYSYGSGLGVGGGF--SSSSGRAIGG--GLSSVGGGSSTIKYTTTS- 555
            ||||.||.|.|.|.||||.|..|||.|.|.||  ...||.:|||  |:|..|||...|..:.:| 
Zfish   494 GYGGGSGYGGGSGFGGGSGYGGGSGFGGGSGFGYGGGSGMSIGGGSGMSMSGGGGGQISMSRSSI 558

Human   556 -SSSRKSY 562
             ||.::.:
Zfish   559 VSSQKRRF 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT6ANP_005545.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/33 (21%)
Head 2..162 83/178 (47%)
Keratin_2_head <59..159 CDD:318448 58/105 (55%)
Filament 162..475 CDD:306535 224/312 (72%)
Coil 1A 163..198 31/34 (91%)
Linker 1 199..217 8/17 (47%)
Coil 1B 218..309 65/90 (72%)
Linker 12 310..333 15/22 (68%)
Coil 2 334..472 98/137 (72%)
Tail 473..564 42/103 (41%)
krt5NP_571231.2 Keratin_2_head <129..153 CDD:292825 17/23 (74%)
Filament 156..467 CDD:278467 224/312 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I21828
eggNOG 1 0.900 - - E1_28N6C
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 622 1.000 Inparanoid score I5034
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X62
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.960

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