DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15012 and TMEM50B

DIOPT Version :10

Sequence 1:NP_001163347.1 Gene:CG15012 / 38529 FlyBaseID:FBgn0035528 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_006125.2 Gene:TMEM50B / 757 HGNCID:1280 Length:158 Species:Homo sapiens


Alignment Length:144 Identity:57/144 - (39%)
Similarity:89/144 - (61%) Gaps:10/144 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DASRNRN--TSIIAGLLFFAGWWVLIDAMSIDGKHQITTGHVF--IGIFGTISFCMVNAVKGEHI 74
            |.|..||  .|::||:|||.|||::|||..:..|.: ...|.|  .|:|.|::|.|:|||....:
Human    17 DWSERRNAVASVVAGILFFTGWWIMIDAAVVYPKPE-QLNHAFHTCGVFSTLAFFMINAVSNAQV 80

  Fly    75 SDENSSESGA---RIAKIWLLVGFLMGFASIIAAIWVMIDDFINNEKKDGWFGVALLMQNVFILF 136
            ..: |.|||.   ..|::||.:||::.|.|:||::|::...:: .:..|.:.|:|:..||..|.|
Human    81 RGD-SYESGCLGRTGARVWLFIGFMLMFGSLIASMWILFGAYV-TQNTDVYPGLAVFFQNALIFF 143

  Fly   137 ASLVYKFGRNEEEW 150
            ::|:|||||.||.|
Human   144 STLIYKFGRTEELW 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15012NP_001163347.1 UPF0220 9..150 CDD:428395 56/142 (39%)
TMEM50BNP_006125.2 UPF0220 9..157 CDD:428395 56/142 (39%)

Return to query results.
Submit another query.