DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15012 and Tmem50a

DIOPT Version :9

Sequence 1:NP_001163347.1 Gene:CG15012 / 38529 FlyBaseID:FBgn0035528 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001120997.1 Gene:Tmem50a / 298552 RGDID:1305638 Length:157 Species:Rattus norvegicus


Alignment Length:142 Identity:57/142 - (40%)
Similarity:84/142 - (59%) Gaps:5/142 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DASRNRNT--SIIAGLLFFAGWWVLID-AMSIDGKHQITTGHVFIGIFGTISFCMVNAVKGEHIS 75
            |....|||  ||.||:|||.|||::|| |:......|....:...|:..||:|.|:|||....:.
  Rat    15 DWGEKRNTVASIAAGVLFFTGWWIIIDAAVMYPNMEQFNHSYHACGVIATIAFLMINAVSNGQVR 79

  Fly    76 DENSSES--GARIAKIWLLVGFLMGFASIIAAIWVMIDDFINNEKKDGWFGVALLMQNVFILFAS 138
            .::.||.  |...|:|||.:||::.|.|:||::|::...::..||...:.|:|:..||.||.|..
  Rat    80 GDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFIFFGG 144

  Fly   139 LVYKFGRNEEEW 150
            ||:||||.|:.|
  Rat   145 LVFKFGRTEDLW 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15012NP_001163347.1 UPF0220 9..150 CDD:283030 56/140 (40%)
Tmem50aNP_001120997.1 UPF0220 8..156 CDD:283030 56/140 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346814
Domainoid 1 1.000 113 1.000 Domainoid score I5984
eggNOG 1 0.900 - - E1_KOG3393
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4469
Inparanoid 1 1.050 116 1.000 Inparanoid score I4722
OMA 1 1.010 - - QHG54488
OrthoDB 1 1.010 - - D1422977at2759
OrthoFinder 1 1.000 - - FOG0003332
OrthoInspector 1 1.000 - - otm46273
orthoMCL 1 0.900 - - OOG6_102597
Panther 1 1.100 - - LDO PTHR13180
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2700
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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