DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15012 and Tmem50a

DIOPT Version :10

Sequence 1:NP_001163347.1 Gene:CG15012 / 38529 FlyBaseID:FBgn0035528 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001120997.1 Gene:Tmem50a / 298552 RGDID:1305638 Length:157 Species:Rattus norvegicus


Alignment Length:142 Identity:57/142 - (40%)
Similarity:84/142 - (59%) Gaps:5/142 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DASRNRNT--SIIAGLLFFAGWWVLID-AMSIDGKHQITTGHVFIGIFGTISFCMVNAVKGEHIS 75
            |....|||  ||.||:|||.|||::|| |:......|....:...|:..||:|.|:|||....:.
  Rat    15 DWGEKRNTVASIAAGVLFFTGWWIIIDAAVMYPNMEQFNHSYHACGVIATIAFLMINAVSNGQVR 79

  Fly    76 DENSSES--GARIAKIWLLVGFLMGFASIIAAIWVMIDDFINNEKKDGWFGVALLMQNVFILFAS 138
            .::.||.  |...|:|||.:||::.|.|:||::|::...::..||...:.|:|:..||.||.|..
  Rat    80 GDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEKAIVYPGIAVFFQNAFIFFGG 144

  Fly   139 LVYKFGRNEEEW 150
            ||:||||.|:.|
  Rat   145 LVFKFGRTEDLW 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15012NP_001163347.1 UPF0220 9..150 CDD:428395 56/140 (40%)
Tmem50aNP_001120997.1 UPF0220 8..156 CDD:428395 56/140 (40%)

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