DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEbeta and Gtf2e2

DIOPT Version :9

Sequence 1:NP_523923.1 Gene:TfIIEbeta / 38527 FlyBaseID:FBgn0015829 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_006509248.1 Gene:Gtf2e2 / 68153 MGIID:1915403 Length:295 Species:Mus musculus


Alignment Length:297 Identity:163/297 - (54%)
Similarity:210/297 - (70%) Gaps:22/297 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPALLREREAFKKRAMATPTVEKKSKPDRPAPPPPSDDSRRKM----------RPPNAPRLDAT 55
            |||:|||:||.|||||::||.|||::.   |:..|.|..|::|.          ...|:...:.:
Mouse     4 MDPSLLRDRELFKKRALSTPVVEKRAV---PSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNNGS 65

  Fly    56 -TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASEALHN 119
             ..|.:||||.|:||||||||.:|:||||.||.||||::||||||..||||...|.||.:|||.|
Mouse    66 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMTEALVN 130

  Fly   120 NPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEKVLKNRSAEI 184
            |||:|.  ...|::|||.|.:||.|.|:|||..||.:|||||||:|::|.||:.:|.:|....:|
Mouse   131 NPKIEV--VDGKYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNSQKAVKALGDQI 193

  Fly   185 LFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYLEKQGIRSMQDHGLKK- 248
            |||.|| |||||||:||::..||||:||||||||.|||:||:.||:|||::|||.|||:.|.|| 
Mouse   194 LFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKV 257

  Fly   249 -AIPKRKK-AANKKRQFKKPRDNEHLADVLEVYEDNT 283
             :|.:||| |:.|||:||  ..|||||.||:.|.|.|
Mouse   258 ASIQRRKKPASQKKRRFK--THNEHLAGVLKDYSDIT 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEbetaNP_523923.1 TFIIE_beta_winged_helix 61..141 CDD:153423 50/79 (63%)
Gtf2e2XP_006509248.1 TFIIE_beta_winged_helix 72..150 CDD:153423 50/79 (63%)
TFA2_Winged_2 150..208 CDD:375569 35/58 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837900
Domainoid 1 1.000 96 1.000 Domainoid score I7333
eggNOG 1 0.900 - - E1_COG5174
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37573
Inparanoid 1 1.050 296 1.000 Inparanoid score I2721
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48945
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007303
OrthoInspector 1 1.000 - - oto92570
orthoMCL 1 0.900 - - OOG6_103945
Panther 1 1.100 - - LDO PTHR12716
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1465
SonicParanoid 1 1.000 - - X4699
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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