DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEbeta and gtf2e2

DIOPT Version :9

Sequence 1:NP_523923.1 Gene:TfIIEbeta / 38527 FlyBaseID:FBgn0015829 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001016555.1 Gene:gtf2e2 / 549309 XenbaseID:XB-GENE-962385 Length:288 Species:Xenopus tropicalis


Alignment Length:292 Identity:166/292 - (56%)
Similarity:208/292 - (71%) Gaps:21/292 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPALLREREAFKKRAMATPTVEKKSKPDRPAPPPPSDDSRR-KMRPP----NAPRLDAT----T 56
            |||||||:||.|||||:.||.|||     ||:....|...:| |:.|.    :.|.||.:    .
 Frog     1 MDPALLRDRELFKKRALTTPAVEK-----RPSASSESSKKKRAKLEPSGTSGSKPSLDGSNGSFN 60

  Fly    57 YKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASEALHNNP 121
            .|::||||.|:||||||||.:|:||||.||.||||:|||||||..||||...|.||.||||.|||
 Frog    61 LKSLSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGIKQKQWLMSEALVNNP 125

  Fly   122 KVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEKVLKNRSAEILF 186
            |:|.  ...|::|||.|.:||.|.|:|||.:||.:|||||||:|::|.||:.:|.:|....:|:|
 Frog   126 KIEI--IDGKYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQKAIKALGDQIVF 188

  Fly   187 VVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYLEKQGIRSMQDHGLKKAIP 251
            |.|| ||||||||||::..|:||:||||||||..||:|||.||:|||::|||.||||.|.||.||
 Frog   189 VTRP-DKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSMDDEKIEEYLKRQGISSMQDSGPKKIIP 252

  Fly   252 --KRKKAANKKRQFKKPRDNEHLADVLEVYED 281
              ||||..:::|:||  ..|:|||.||:.|.|
 Frog   253 VQKRKKTTSQRRRFK--THNDHLAGVLKDYTD 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEbetaNP_523923.1 TFIIE_beta_winged_helix 61..141 CDD:153423 52/79 (66%)
gtf2e2NP_001016555.1 TFIIE_beta_winged_helix 65..143 CDD:153423 52/79 (66%)
TFA2_Winged_2 143..201 CDD:375569 34/58 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7150
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37573
Inparanoid 1 1.050 304 1.000 Inparanoid score I2610
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1160863at2759
OrthoFinder 1 1.000 - - FOG0007303
OrthoInspector 1 1.000 - - oto102869
Panther 1 1.100 - - LDO PTHR12716
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4699
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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