DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEbeta and gtf2e2

DIOPT Version :10

Sequence 1:NP_523923.1 Gene:TfIIEbeta / 38527 FlyBaseID:FBgn0015829 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_997896.1 Gene:gtf2e2 / 334854 ZFINID:ZDB-GENE-030131-6794 Length:291 Species:Danio rerio


Alignment Length:304 Identity:162/304 - (53%)
Similarity:202/304 - (66%) Gaps:30/304 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPALLREREAFKKRAMATPTVE--------------KKSKPDRPAPPPPSDDSRRKMRPPNAPR 51
            ||||||||||.|||||::||.||              ||||||:.:    |..|:....|.|.  
Zfish     1 MDPALLRERELFKKRALSTPAVEKRPAASEASGSSKKKKSKPDKES----SSSSKNNSDPSNG-- 59

  Fly    52 LDATTYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASEA 116
              :...|.:||||.|:|||||:||.:|:||||.||.||||::||||||..||||...|.||.|||
Zfish    60 --SFNLKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGMKQKQWLMSEA 122

  Fly   117 LHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEKVLKNRS 181
            |.:|||::...  .|::|||.|.:||.|.|:|||.:||..||||:|||||:|.||:..|.:|...
Zfish   123 LASNPKIDVRE--GKYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNAAKAIKALG 185

  Fly   182 AEILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYLEKQGIRSMQDHGL 246
            .:|:||.|| ||||||||||:...|.||:||||||||..||::|:.||:|||:||||.|||:.|.
Zfish   186 DQIIFVTRP-DKKKILFYNDKHCQFVVDEEFQKLWRSVPVDSIDEEKIEEYLKKQGISSMQETGP 249

  Fly   247 KKAIP--KRKK-AANKKRQFKKPRDNEHLADVLEVYEDNTLTLK 287
            ||..|  |||| ...:||::|  ..|:||..|||.|.|...:.|
Zfish   250 KKMTPIQKRKKPGTQRKRRYK--THNDHLNGVLEDYFDGVPSKK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEbetaNP_523923.1 TFIIE_beta_winged_helix 61..141 CDD:153423 48/79 (61%)
TFA2_Winged_2 141..200 CDD:465658 35/58 (60%)
gtf2e2NP_997896.1 TFIIE_beta_winged_helix 67..145 CDD:153423 48/79 (61%)
TFA2_Winged_2 145..203 CDD:465658 35/58 (60%)

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