DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TfIIEbeta and GTF2E2

DIOPT Version :9

Sequence 1:NP_523923.1 Gene:TfIIEbeta / 38527 FlyBaseID:FBgn0015829 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_002086.1 Gene:GTF2E2 / 2961 HGNCID:4651 Length:291 Species:Homo sapiens


Alignment Length:298 Identity:163/298 - (54%)
Similarity:208/298 - (69%) Gaps:25/298 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPALLREREAFKKRAMATPTVEKKSKPDRPAPPPPSDDSRRKMR-----------PPNAPRLDA 54
            |||:||||||.|||||::||.|||:|     |....|..|.:|.:           ..|:...:.
Human     1 MDPSLLRERELFKKRALSTPVVEKRS-----ASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60

  Fly    55 T-TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASEALH 118
            : ..|.:||||.|:||||||||.:|:||||.||.||||:|||||||..||||...|.||.:|||.
Human    61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLMTEALV 125

  Fly   119 NNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEKVLKNRSAE 183
            ||||:|.  ...|::|||.|.::|.|.|:|||.|||.:|||||||:|::|:||:.:|.:|....:
Human   126 NNPKIEV--IDGKYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQKAVKALGDQ 188

  Fly   184 ILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYLEKQGIRSMQDHGLKK 248
            ||||.|| |||||||:||::..||||:||||||||.|||:||:.||:|||::|||.|||:.|.||
Human   189 ILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKK 252

  Fly   249 AIP---KRKKAANKKRQFKKPRDNEHLADVLEVYEDNT 283
            ..|   ::|.|:.|||:||  ..|||||.||:.|.|.|
Human   253 VAPIQRRKKPASQKKRRFK--THNEHLAGVLKDYSDIT 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEbetaNP_523923.1 TFIIE_beta_winged_helix 61..141 CDD:153423 51/79 (65%)
GTF2E2NP_002086.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 25/66 (38%)
TFIIE_beta_winged_helix 68..146 CDD:153423 51/79 (65%)
TFA2_Winged_2 146..204 CDD:407955 35/58 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..272 14/30 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147819
Domainoid 1 1.000 97 1.000 Domainoid score I7301
eggNOG 1 0.900 - - E1_COG5174
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37573
Inparanoid 1 1.050 298 1.000 Inparanoid score I2730
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48945
OrthoDB 1 1.010 - - D1160863at2759
OrthoFinder 1 1.000 - - FOG0007303
OrthoInspector 1 1.000 - - oto89003
orthoMCL 1 0.900 - - OOG6_103945
Panther 1 1.100 - - LDO PTHR12716
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1465
SonicParanoid 1 1.000 - - X4699
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.