DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIEbeta and tfa2

DIOPT Version :9

Sequence 1:NP_523923.1 Gene:TfIIEbeta / 38527 FlyBaseID:FBgn0015829 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_587879.1 Gene:tfa2 / 2539236 PomBaseID:SPCC1672.08c Length:285 Species:Schizosaccharomyces pombe


Alignment Length:309 Identity:69/309 - (22%)
Similarity:130/309 - (42%) Gaps:64/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ALLREREAFKKRAMATPTVEKKSKPDRPAPPPP------SDDSRRKMRPPNAPRLDATTYKTM-- 60
            :|..:..:|||: :|...:..|.:|.:||.|.|      :|........|.:..|.....||.  
pombe     3 SLSDQLSSFKKK-VANQPIYAKPQPRQPASPTPTAYLNSNDGHSSAASSPGSYSLKKKRSKTSLV 66

  Fly    61 ------SGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLAS----- 114
                  ||...:....|...|::::.|::     |.|.:||             .::|::     
pombe    67 YSQPADSGVGTHYLSQLHYAVEYLKERNE-----PKTAEEI-------------ASYLSTPLTPM 113

  Fly   115 --EALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLL---KQHDLKGLGGILLDDVQESLPHCE 174
              ..|..|.::........|:|||::.|:.|..|:..|   |.|     .|:.:.::::..|:..
pombe   114 LLNLLKKNNRIYYDERNETFTFKPLHNIRSGAGLLAYLDSQKTH-----VGMSIKELRDGWPNVT 173

  Fly   175 KVLK--NRSAEILFV-VRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYLEKQ 236
            ..|:  .:..|:|.: .|.....|:::.||::.:..||.|||::|....:....|  :...|.|.
pombe   174 VELEELEKQGEVLLLRTRKDGVPKMVWRNDKSCDCHVDKEFQQVWHEIPIPPTLD--LASELGKY 236

  Fly   237 GIR--SMQDHGLKKA----IPKRKKAANKKRQFKKPRDNEHLADVLEVY 279
            |::  |:....:|:|    .||:||...::.:.    .|.|| ::|..|
pombe   237 GLKPTSVDPSTVKRAGHNQTPKQKKPKTRRGKI----TNTHL-NILRDY 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIEbetaNP_523923.1 TFIIE_beta_winged_helix 61..141 CDD:153423 16/86 (19%)
tfa2NP_587879.1 TFA2 1..284 CDD:227501 69/309 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5174
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I2058
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103945
Panther 1 1.100 - - LDO PTHR12716
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1465
SonicParanoid 1 1.000 - - X4699
TreeFam 00.000 Not matched by this tool.
87.890

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