Protein Alignment CG1316 and Celf6

DIOPT Version :9

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: XP_006511603.1
• Gene: Celf6 / 76183
• MGIID: 1923433
• Length: 481
• Species: Mus musculus
• Alignment Length: 541
• Identity: 114/541 - (21%)
• Similarity: 183/541 - (33%)
• Gaps: 190/541 - (35%)

  Fly     6 SQSRSGGGRGGQEYSNDDDP--PMS-----RLFI-ICNKAHTEEDFREAFSPYGEIEDIWVVKDK 62
            |.:.||||..|.    :..|  ||.     :||: ...:...|:|.:..|..:|.|.::.|:||:
Mouse    21 STADSGGGMSGL----NPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDR 81

  Fly    63 HTQENKGIAYVKFSKTSDAAKAQEEMN-GKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLF 126
            .|..:||.|::.:.....|.|||..:: .||:..|:|.::|..||:..:|.::         :||
Mouse    82 LTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDR---------KLF 137

  Fly   127 I-VIPKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAV 190
            : ::.|...|||:|..|..:|.:|..|:::.. :|..||..:|:|
Mouse   138 VGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKF-------------------- 181

  Fly   191 FAEPKGSTRTQRDQYGRPSEDNPLYSSSGRGNSNFNG-GGSSSGGGGSNSYNNDWNVSQNNDMAA 254
                                     .|.|...:...| .||.:..|.|:|.  ...::..:...|
Mouse   182 -------------------------GSQGEAQAAIQGLHGSRTMTGASSSL--VVKLADTDRERA 219

  Fly   255 FLRMQNV----------PVAQPSCLEVNVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNEAL 309
            ..|||.:          |:...:|.....:...:|..|              :....||...:..
Mouse   220 LRRMQQMAGQLGAFHPAPLPLGACGAYTTAILQHQAAL--------------LAAAQGPGLGQVA 270

  Fly   310 VVYDN---------------PEAAIYA-----KDKLHGLEYPMGERIIVKVNGMSSARMDTSFID 354
            .|...               |.||..:     ...|.||..|||      |||..|.   |...:
Mouse   271 AVAAQMQHVAAFSLVAAPLLPAAANTSPGGNGPGALPGLPAPMG------VNGFGSL---TPQSN 326

  Fly   355 KRTKKDAICN---VPLPPTQP-LASPDDQV-----------------AQRLFIVLSANLPHSILK 398
            .:...|.:.|   .|.|...| :|.|..|.                 |...|....:.||....:
Mouse   327 GQPGSDTLYNNGVSPYPAKSPSVADPLQQAYAGIHHYAAAYPSAYAPASTAFSQQPSALPQQQRE 391

  Fly   399 -----NIFSCWSGLIDVYLLP-------------------------------NKNCGYVKYAEVE 427
                 |:|        :|.||                               :|..|:|.:....
Mouse   392 GPEGCNLF--------IYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPT 448

  Fly   428 SAQLAIRTLNGAEICGTKIKV 448
            |||.||:.:||.:|...::||
Mouse   449 SAQTAIQAMNGFQIGMKRLKV 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	26/88 (30%)
		RRM2_RBM45	122..195	CDD:240813	16/73 (22%)
		RRM3_RBM45	267..339	CDD:240814	15/91 (16%)
		RRM4_RBM45	383..449	CDD:240815	21/102 (21%)
Celf6	XP_006511603.1	RRM1_CELF3_4_5_6	41..127	CDD:241076	24/85 (28%)
		PABP-1234	<48..390	CDD:130689	87/421 (21%)
		RRM2_CELF3_4_5_6	133..213	CDD:241079	24/136 (18%)
		RRM3_CELF3_4_5_6	392..470	CDD:241083	18/86 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910