DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1316 and rbm45

DIOPT Version :9

Sequence 1:NP_647887.1 Gene:CG1316 / 38526 FlyBaseID:FBgn0035526 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001120874.1 Gene:rbm45 / 568524 ZFINID:ZDB-GENE-070122-4 Length:467 Species:Danio rerio


Alignment Length:468 Identity:171/468 - (36%)
Similarity:272/468 - (58%) Gaps:63/468 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEE 87
            |:||.||||::.:|:.||:..||:|:.:|||:||||||||.|:|:||:|::||:|:|.|..|.||
Zfish    12 DEPPNSRLFLVTSKSITEDTIRESFASFGEIQDIWVVKDKQTKESKGVAFIKFAKSSQACTAMEE 76

  Fly    88 MNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVT 152
            |:|:.:.:..:.:||.:|.:|:.||:: :.|.|:..|:|::||||.||:|::|.|..:||:|...
Zfish    77 MHGRCLAEGTKPIKVFIAQSRSSGSHR-DVEDEELTRIFVMIPKTFTEDDLKETFKVYGDIEYAI 140

  Fly   153 IVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPK-GSTRTQRDQYGRPSEDNPLYS 216
            |::.|..|:.||.|||||.|...||.|.|||...::|:.|||: .::....|.:..|....  :|
Zfish   141 IIRNKTTGDSKGLGYVRFHKPSQAAKAVENCDKTFRAIIAEPRTKNSSADNDYFSNPRTTE--HS 203

  Fly   217 SSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQ 281
            :|..|:|::.....||....:.||::|                    ....||.|:....|:|:|
Zfish   204 TSELGSSSYAFAQESSSYSAAESYSSD--------------------IITRCLMVSSRVSVSQEQ 248

  Fly   282 LWRLFDIIPGLDYCQIMR-EHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGERIIVKV----- 340
            ::.|||:|||||||:|.| ::|....:.:|.|.|..:|:|||:||:|.|||.|.|:.|..     
Zfish   249 IYSLFDLIPGLDYCEIQRDQYGFSKGQVVVRYSNLGSAVYAKEKLNGFEYPPGNRLSVSFVDDGE 313

  Fly   341 -----------------------NGMSSAR-MDTSF------IDKRTKKDAICNVPLPPTQPLAS 375
                                   ||.|.:: |.||.      :.::.:.....|:|.|  :.|.:
Zfish   314 DRTSPVGKMAMQLVAAQMMSMVWNGPSGSQLMKTSAGYTAPPVPQKARLQTDANLPAP--KKLLA 376

  Fly   376 PDDQVAQRLFIVLSAN-LPHSILKNIFSCWSGLIDVYLLPNKNCGYVKYAEVESAQLAIRTLNGA 439
            .|..|.:|||::.:.: ||..:|:::|..:..||:|||:|.:|.||:|||:..||..||.|::|.
Zfish   377 LDSVVKERLFVIFNPSPLPVEVLEDVFCRFGSLIEVYLVPGRNVGYIKYADRRSAHDAIDTMHGK 441

  Fly   440 EICGTKIKVMEAE 452
            .:.|.|:|||.|:
Zfish   442 VVNGVKMKVMLAD 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1316NP_647887.1 RRM1_RBM45 25..105 CDD:240812 40/79 (51%)
RRM2_RBM45 122..195 CDD:240813 34/72 (47%)
RRM3_RBM45 267..339 CDD:240814 34/72 (47%)
RRM4_RBM45 383..449 CDD:240815 28/66 (42%)
rbm45NP_001120874.1 RRM1_RBM45 14..94 CDD:240812 40/79 (51%)
RRM2_RBM45 110..183 CDD:240813 34/72 (47%)
RRM3_RBM45 234..307 CDD:240814 34/72 (47%)
RRM4_RBM45 384..451 CDD:240815 28/66 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579310
Domainoid 1 1.000 75 1.000 Domainoid score I9033
eggNOG 1 0.900 - - E1_2CAJT
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15560
Inparanoid 1 1.050 297 1.000 Inparanoid score I2716
OMA 1 1.010 - - QHG48842
OrthoDB 1 1.010 - - D299261at33208
OrthoFinder 1 1.000 - - FOG0007975
OrthoInspector 1 1.000 - - oto41176
orthoMCL 1 0.900 - - OOG6_108069
Panther 1 1.100 - - LDO PTHR10352
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5751
SonicParanoid 1 1.000 - - X5918
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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