Protein Alignment CG1316 and Rox8

DIOPT Version :9

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Alignment Length: 238
• Identity: 54/238 - (22%)
• Similarity: 93/238 - (39%)
• Gaps: 79/238 - (33%)

  Fly    41 EDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVA 105
            |..||||:|:|||.:..:|:|.||.::||.|:|.|.|.::|..|.:.|||:.||  .|:::...:
  Fly   109 ETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIG--SRSIRTNWS 171

  Fly   106 ANR---------------------NQGSNKSENEQEKYVRLFI-------------VIPKTATEE 136
            ..:                     ..||....:::..:..::.             ..|...:::
  Fly   172 TRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDD 236

  Fly   137 DIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPKGSTRTQ 201
            .:.:.|.|:|.::.|.:.|:      |||.:::|.....||.|.|:
  Fly   237 LMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEAAAHAIEH------------------- 276

  Fly   202 RDQYGRPSEDNPLYSSSGRGN--SNFNGGGSSSGGGGSNSYNN 242
                        .::|...||  ..|.|    ...||.||.||
  Fly   277 ------------THNSEVHGNLVKCFWG----KENGGDNSANN 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	27/63 (43%)
		RRM2_RBM45	122..195	CDD:240813	14/85 (16%)
		RRM3_RBM45	267..339	CDD:240814
		RRM4_RBM45	383..449	CDD:240815
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	41/172 (24%)
		RRM1_TIA1_like	9..80	CDD:240798
		RRM2_TIA1_like	96..170	CDD:240799	27/62 (44%)
		RRM3_TIA1_like	221..294	CDD:240800	19/113 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010