Protein Alignment CG1316 and rbm39a

DIOPT Version :9

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001012304.1
• Gene: rbm39a / 406251
• ZFINID: ZDB-GENE-040426-2852
• Length: 523
• Species: Danio rerio
• Alignment Length: 496
• Identity: 95/496 - (19%)
• Similarity: 178/496 - (35%)
• Gaps: 167/496 - (33%)

  Fly     1 MSDYRSQSRSGGGRGGQEYSNDDDP---PMSRL--------FIICNKAHTE---EDFREAFSPYG 51
            :|..||:|||       .:..|..|   |:..|        .:.|.:....   .|..|.||..|
Zfish   116 LSRRRSRSRS-------PFKKDRSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVG 173

  Fly    52 EIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAAN---RNQGSN 113
            ::.|:.::.|::::.:|||||::|..::....|......:.:|     :.::|.|:   :|:.:.
Zfish   174 KVRDVRIISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLG-----VPIIVQASQAEKNRAAA 233

  Fly   114 KSENEQEKY---VRLFI-VIPKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFY 174
            .:.|.|:..   :||:: .:....||:.:|..|..:|.::|:.::.:...|..||:|::.|:...
Zfish   234 LANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE 298

  Fly   175 YAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDNPLYSSSGRGNSNFNGGGSSSGGGGSNS 239
            .|..|.|..:....|                |||.:..
Zfish   299 CAKKALEQLNGFELA----------------GRPMKVG--------------------------- 320

  Fly   240 YNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQLWRLFDIIPGLDY-----CQIMR 299
                 :|::..|.:                  ..|:.::.|:|.|     .|:|.     .|:|.
Zfish   321 -----HVTERTDAS------------------TASSFLDNDELER-----TGIDLGTTGRLQLMA 357

  Fly   300 EHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGERIIVKVNG------MSSARMD--TSFIDKR 356
            .....|                     ||:.|...:..::::|      .::|.|:  .||
Zfish   358 RLAEGT---------------------GLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSF---- 397

  Fly   357 TKKDAICNVPLPPTQPLASPDDQVAQRLFIVLSANLPHSILKN------------IFSC--WSGL 407
                   |:.:|..|.|..|...:|...|.:.:...|:|  :|            |..|  ..|:
Zfish   398 -------NINVPTNQALNLPSQPIATHCFQLSNMFNPNS--ENDHGWEIEIQDDVIEECNKHGGV 453

  Fly   408 IDVYLLPNKNCG--YVKYAEVESAQLAIRTLNGAEICGTKI 446
            |.:|:......|  |||...:.:|..|:..|:|....|..|
Zfish   454 IHIYVDKKSAEGNVYVKCPTIPAAMAAVSALHGRWFGGKMI 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	19/93 (20%)
		RRM2_RBM45	122..195	CDD:240813	17/76 (22%)
		RRM3_RBM45	267..339	CDD:240814	12/76 (16%)
		RRM4_RBM45	383..449	CDD:240815	19/80 (24%)
rbm39a	NP_001012304.1	SF-CC1	91..511	CDD:273721	95/496 (19%)
		RRM1_RBM39	148..232	CDD:240980	19/88 (22%)
		RRM2_RBM23_RBM39	248..320	CDD:240730	19/87 (22%)
		RBM39linker	337..432	CDD:292157	25/133 (19%)
		RRM3_RBM39_like	416..500	CDD:240731	19/81 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910