Protein Alignment CG1316 and Rbm45

DIOPT Version :10

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_695218.1
• Gene: Rbm45 / 266631
• RGDID: 628862
• Length: 476
• Species: Rattus norvegicus
• Alignment Length: 493
• Identity: 181/493 - (36%)
• Similarity: 271/493 - (54%)
• Gaps: 71/493 - (14%)

  Fly     1 MSDYRSQSRSGGGRGGQEYSNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQ 65
            |.|..|...|||.|.|.:  :.|:||.||:|::.:|..:|...||.|||:|:|:|||||:||||:
  Rat     1 MDDAGSSGGSGGFRPGVD--SLDEPPNSRIFLVISKYTSESVLREHFSPFGDIQDIWVVRDKHTK 63

  Fly    66 ENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMD-RTLKVLVAANRNQGSNKSENEQEKYVRLFIVI 129
            |:||||:|||:::|.|.:|.|||:|:.:|..| :.:||.:|.:|:.||:: :.|.|:..|:|::|
  Rat    64 ESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHR-DVEDEELTRIFVMI 127

  Fly   130 PKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
            ||:.||||:||:|..:||:|..:::|.|..|..||.||||:.|...||.|.|||...::|:.|||
  Rat   128 PKSYTEEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRALLAEP 192

  Fly   195 KGST--RTQRDQY--------GRPSEDNPLYSSSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQN 249
            |...  ..::|.|        |.....| |:...|...|.|:              ..|.|.|:.
  Rat   193 KNKVLESPEQDYYSSVRQETLGHEPRGN-LFPFVGEQQSEFS--------------TFDKNDSRG 242

  Fly   250 NDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNEALVVYDN 314
            .:  |..:..:|....|          ..::||:.:|||:|||:||::.|:........:|.|.|
  Rat   243 QE--AISKRLSVASRVP----------FTEEQLFSIFDIVPGLEYCEVHRDPYLNYGHGVVQYFN 295

  Fly   315 PEAAIYAKDKLHGLEYPMGERIIVKV--NGMSSA----RMDTSFIDKRTKKDAICN--------- 364
            ..:|:||:.||||.:||.|.||.|..  :|.:||    :|.|..:..:.......|
  Rat   296 VASAVYAQYKLHGFQYPPGNRIAVSFLDDGSNSADLIRKMATQMVAAQLASTVWSNPSHQQFLQF 360

  Fly   365 --------------VPLPPTQPLASPDDQVAQRLFIVLSAN-LPHSILKNIFSCWSGLIDVYLLP 414
                          |.||..:..|.|:..|.:|||||.:.: ||..:|::||..:..||:|||:.
  Rat   361 GGSAGSQVPQIQTDVVLPSCRKKAPPETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVYLVS 425

  Fly   415 NKNCGYVKYAEVESAQLAIRTLNGAEICGTKIKVMEAE 452
            .||.||||||:..||..||.||:|..:.|.::|||.|:
  Rat   426 GKNVGYVKYADRMSANDAITTLHGKILNGVRLKVMLAD 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:409801	42/80 (53%)
		RRM_SF	122..195	CDD:473069	34/72 (47%)
		RRM3_RBM45	267..339	CDD:409803	26/71 (37%)
		RRM4_RBM45	383..449	CDD:409804	32/66 (48%)
Rbm45	NP_695218.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..20		8/20 (40%)
		RRM1_RBM45	23..104	CDD:409801	42/80 (53%)
		RRM2_RBM45	120..193	CDD:409802	34/72 (47%)
		RRM3_RBM45	248..320	CDD:409803	28/81 (35%)
		RRM4_RBM45	393..460	CDD:409804	32/66 (48%)